HL_11HV_065
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11HV_065 not in the Motif Atlas
- Homologous match to HL_8QYX_073
- Geometric discrepancy: 0.0568
- The information below is about HL_8QYX_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
11HV|1|5|G|86
11HV|1|5|G|87
11HV|1|5|A|88
11HV|1|5|G|89
11HV|1|5|A|90
11HV|1|5|C|91
Current chains
- Chain 5
- 5S rRNA
Nearby chains
- Chain 10
- Ribosomal protein L10
- Chain 20
- Large ribosomal subunit protein eL20
- Chain 28
- Large subunit ribosomal RNA; LSU rRNA
- Chain L7
- 60S ribosomal protein L7
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