HL_11IQ_013
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAGCCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11IQ_013 not in the Motif Atlas
- Homologous match to HL_9PN5_091
- Geometric discrepancy: 0.108
- The information below is about HL_9PN5_091
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
11IQ|1|18|C|618
11IQ|1|18|A|619
11IQ|1|18|G|620
11IQ|1|18|C|621
11IQ|1|18|C|622
11IQ|1|18|G|623
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain RB
- SERBP1
- Chain RR
- 40S ribosomal protein S23
Coloring options: