RNA 3D Hub //

11IQ Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_11IQ_0011/18/7:17No text annotation
homologous
HL_9H3G_079
HL_73535.3
HL_11IQ_0031/18/156:162No text annotation
homologous
HL_9PN5_079
HL_34789.6
HL_11IQ_0051/18/288:295No text annotation
homologous
HL_9PN5_082
HL_67772.3
HL_11IQ_0061/18/377:387No text annotation
geometric
HL_8GLP_091
HL_50525.1
HL_11IQ_0071/18/416:421No text annotation
homologous
HL_9H3G_085
HL_34789.6
HL_11IQ_0081/18/441:452No text annotation
homologous
HL_9PN5_086
HL_86432.3
HL_11IQ_0091/18/462:467No text annotation
homologous
HL_9PN5_087
HL_61337.6
HL_11IQ_0101/18/498:504No text annotation
homologous
HL_9PN5_088
HL_25795.1
HL_11IQ_0121/18/569:581No text annotation
homologous
HL_9PN5_090
HL_68749.3
HL_11IQ_0131/18/618:623No text annotation
homologous
HL_9PN5_091
HL_34789.6
HL_11IQ_0141/18/820:828No text annotation
homologous
HL_9PN5_092
HL_11974.4
HL_11IQ_0171/18/957:966No text annotation
homologous
HL_9PN5_095
HL_38491.4
HL_11IQ_0181/18/994:999No text annotation
homologous
HL_9H3G_094
HL_34789.6
HL_11IQ_0191/18/1054:1064No text annotation
homologous
HL_9H3G_095
HL_38491.4
HL_11IQ_0211/18/1141:1146No text annotation
homologous
HL_9H3G_097
HL_34789.6
HL_11IQ_0221/18/1178:1183No text annotation
homologous
HL_9PN5_100
HL_34789.6
HL_11IQ_0231/18/1245:1254No text annotation
homologous
HL_9H3G_099
HL_97521.3
HL_11IQ_0241/18/1295:1304No text annotation
homologous
HL_9H3G_100
HL_98423.5
HL_11IQ_0251/18/1353:1358No text annotation
homologous
HL_9H3G_101
HL_34789.6
HL_11IQ_0261/18/1366:1373No text annotation
homologous
HL_9PN5_104
HL_63894.4
HL_11IQ_0291/18/1565:1570No text annotation
homologous
HL_9PN5_107
HL_34789.6
HL_11IQ_0301/18/1614:1625No text annotation
homologous
HL_9PN5_108
HL_50951.3
HL_11IQ_0311/18/1658:1666No text annotation
homologous
HL_9H3G_107
HL_25307.2
HL_11IQ_0321/18/1847:1852No text annotation
homologous
HL_9H3G_108
HL_34789.6
HL_11IQ_0331/28/37:44No text annotation
homologous
HL_8GLP_001
HL_02262.1
HL_11IQ_0341/28/68:73No text annotation
homologous
HL_8GLP_002
HL_23875.1
HL_11IQ_0351/28/89:95No text annotation
homologous
HL_8GLP_003
HL_76371.4
HL_11IQ_0361/28/131:137No text annotation
homologous
HL_9H3G_008
HL_90436.5
HL_11IQ_0371/28/204:211No text annotation
homologous
HL_8GLP_005
HL_13999.5
HL_11IQ_0381/28/222:226No text annotation
geometric
HL_8GLP_006
HL_75660.10
HL_11IQ_0391/28/230:238No text annotation
homologous
HL_8GLP_007
HL_27670.6
HL_11IQ_0401/28/289:298No text annotation
homologous
HL_8GLP_008
HL_63894.4
HL_11IQ_0411/28/314:323No text annotation
homologous
HL_8GLP_009
HL_00911.4
HL_11IQ_0421/28/368:373No text annotation
homologous
HL_8GLP_010
HL_34789.6
HL_11IQ_0431/28/393:398No text annotation
homologous
HL_8GLP_118
HL_34789.6
HL_11IQ_0441/28/962:970No text annotation
HL_11IQ_0451/28/1317:1326No text annotation
homologous
HL_9PN5_014
HL_33597.7
HL_11IQ_0461/28/1389:1394No text annotation
homologous
HL_8GLP_018
HL_34789.6
HL_11IQ_0471/28/1479:1486No text annotation
HL_11IQ_0481/28/1561:1566No text annotation
homologous
HL_8GLP_022
HL_34789.6
HL_11IQ_0491/28/1593:1602No text annotation
homologous
HL_8GLP_023
HL_50204.3
HL_11IQ_0501/28/1627:1635No text annotation
homologous
HL_8GLP_024
HL_28253.1
HL_11IQ_0511/28/1675:1680No text annotation
homologous
HL_9H3G_028
HL_27530.3
HL_11IQ_0521/28/1816:1823No text annotation
homologous
HL_8GLP_027
HL_63894.4
HL_11IQ_0531/28/1864:1870No text annotation
homologous
HL_8GLP_028
HL_34789.6
HL_11IQ_0541/28/1886:1893No text annotation
homologous
HL_9AXU_024
HL_47171.3
HL_11IQ_0551/28/1978:1988No text annotation
homologous
HL_9AXU_025
NA
HL_11IQ_0561/28/2006:2013No text annotation
homologous
HL_9AXU_026
NA
HL_11IQ_0571/28/2317:2322No text annotation
homologous
HL_8GLP_032
HL_34789.6
HL_11IQ_0581/28/2376:2384T-loop with 2 stacked bulged bases
homologous
HL_8GLP_033
HL_33597.7
HL_11IQ_0591/28/2420:2426No text annotation
homologous
HL_8GLP_034
HL_49081.2
HL_11IQ_0601/28/2458:2463No text annotation
homologous
HL_8GLP_035
HL_34789.6
HL_11IQ_0621/28/2523:2532No text annotation
homologous
HL_8GLP_038
HL_77449.3
HL_11IQ_0641/28/2578:2583No text annotation
homologous
HL_8GLP_040
HL_34789.6
HL_11IQ_0651/28/2624:2632No text annotation
homologous
HL_9PN5_036
HL_22758.3
HL_11IQ_0661/28/2664:2670No text annotation
homologous
HL_8GLP_042
HL_67772.3
HL_11IQ_0681/28/2738:2742No text annotation
homologous
HL_8GLP_044
HL_90436.5
HL_11IQ_0691/28/2792:2799No text annotation
homologous
HL_8GLP_045
HL_28592.4
HL_11IQ_0701/28/2810:2816No text annotation
homologous
HL_9PN5_041
HL_34789.6
HL_11IQ_0711/28/2872:2877No text annotation
homologous
HL_9PN5_042
HL_61337.6
HL_11IQ_0721/28/3614:3618No text annotation
homologous
HL_8GLP_049
NA
HL_11IQ_0731/28/3639:3649No text annotation
homologous
HL_9H3G_049
HL_87681.3
HL_11IQ_0741/28/3668:3674No text annotation
homologous
HL_8GLP_051
HL_34789.6
HL_11IQ_0751/28/3724:3729No text annotation
homologous
HL_9PN5_046
HL_34789.6
HL_11IQ_0761/28/3757:3767No text annotation
homologous
HL_9H3G_052
HL_82185.3
HL_11IQ_0771/28/3796:3804No text annotation
homologous
HL_8GLP_054
HL_77449.3
HL_11IQ_0781/28/3873:3882No text annotation
homologous
HL_8GLP_055
HL_78372.3
HL_11IQ_0791/28/4193:4201LSU P loop
homologous
HL_8GLP_059
HL_11974.4
HL_11IQ_0801/28/4210:4222No text annotation
homologous
HL_8GLP_060
HL_02042.3
HL_11IQ_0811/28/4250:4258No text annotation
homologous
HL_8GLP_061
HL_02452.3
HL_11IQ_0821/28/4270:4277No text annotation
homologous
HL_8GLP_062
HL_52651.4
HL_11IQ_0831/28/4301:4309No text annotation
homologous
HL_8GLP_063
HL_15296.3
HL_11IQ_0841/28/4321:4326No text annotation
homologous
HL_8GLP_064
HL_34789.6
HL_11IQ_0851/28/4352:4362No text annotation
homologous
HL_8GLP_065
HL_14856.1
HL_11IQ_0861/28/4417:4425No text annotation
homologous
HL_9H3G_062
HL_52011.3
HL_11IQ_0871/28/4474:4481No text annotation
homologous
HL_8GLP_067
HL_02262.1
HL_11IQ_0881/28/4497:4503No text annotation
homologous
HL_9H3G_064
HL_02262.1
HL_11IQ_0891/28/4540:4545No text annotation
homologous
HL_8GLP_069
HL_34789.6
HL_11IQ_0901/28/4603:4608No text annotation
homologous
HL_8GLP_070
HL_34789.6
HL_11IQ_0911/28/4646:4651No text annotation
homologous
HL_8GLP_071
HL_12125.4
HL_11IQ_0921/28/4688:4702No text annotation
homologous
HL_9H3G_068
HL_53269.4
HL_11IQ_0931/28/4906:4915No text annotation
HL_11IQ_0941/28/4975:4983No text annotation
homologous
HL_8GLP_075
HL_37889.3
HL_11IQ_0951/5/32:45No text annotation
geometric
HL_8QYX_071
HL_01182.2
HL_11IQ_0961/5/36:41No text annotation
homologous
HL_9AXU_069
HL_59381.4
HL_11IQ_0971/5/86:91No text annotation
homologous
HL_8QYX_073
HL_34789.6
HL_11IQ_0981/58/47:56No text annotation
homologous
HL_9AXU_071
HL_17803.3
HL_11IQ_0991/58/107:112No text annotation
homologous
HL_8GLP_080
HL_23875.1
HL_11IQ_1001/58/121:129No text annotation

Problematic loops

#loop idProblemSequence
HL_11IQ_002No text annotation
HL_11IQ_004No text annotation
HL_11IQ_011No text annotation
HL_11IQ_015No text annotation
HL_11IQ_016No text annotation
HL_11IQ_020No text annotation
HL_11IQ_027No text annotation
HL_11IQ_028No text annotation
HL_11IQ_061No text annotation
HL_11IQ_063No text annotation
HL_11IQ_067No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_11IQ_0011/18/23:25,
1/18/649:651		Isolated non-canonical cWW pair
geometric
IL_8CRE_425
IL_01003.6
IL_11IQ_0021/18/34:36,
1/18/519:521		Isolated non-canonical cWW pair
homologous
IL_9H3G_156
IL_01003.6
IL_11IQ_0031/18/37:40,
1/18/514:518		Double sheared
geometric
IL_8GLP_190
IL_58355.4
IL_11IQ_0041/18/41:47,
1/18/479:481		No text annotation
geometric
IL_9PN5_145
IL_88082.4
IL_11IQ_0051/18/49:51,
1/18/476:477		Minor groove platform
homologous
IL_9H3G_159
IL_41261.1
IL_11IQ_0061/18/57:62,
1/18/86:88		No text annotation
homologous
IL_9PN5_147
IL_61299.8
IL_11IQ_0081/18/108:110,
1/18/351:353		Isolated non-canonical cWW pair
geometric
IL_1T0E_002
IL_71625.5
IL_11IQ_0091/18/110:115,
1/18/348:351		No text annotation
IL_11IQ_0101/18/116:121,
1/18/343:347		No text annotation
homologous
IL_9PN5_151
IL_31545.3
IL_11IQ_0111/18/145:151,
1/18/167:174		No text annotation
homologous
IL_9H3G_165
IL_24485.3
IL_11IQ_0141/18/216:219,
1/18/302:309		No text annotation
IL_11IQ_0151/18/223:288,
1/18/295:298		No text annotation
IL_11IQ_0161/18/312:314,
1/18/336:337		Single bulged A
homologous
IL_9PN5_156
IL_14190.4
IL_11IQ_0181/18/359:364,
1/18/396:403		Kink-turn with non-sequential stacking
homologous
IL_9PN5_159
IL_46174.6
IL_11IQ_0191/18/366:371,
1/18/393:394		No text annotation
geometric
IL_8GLP_211
IL_01372.3
IL_11IQ_0201/18/411:413,
1/18/424:429		No text annotation
homologous
IL_9H3G_175
IL_93336.3
IL_11IQ_0211/18/437:439,
1/18/454:456		Isolated cWH basepair
homologous
IL_9PN5_162
IL_10892.4
IL_11IQ_0221/18/459:461,
1/18/468:470		Isolated non-canonical cWW pair
homologous
IL_9PN5_163
IL_01003.6
IL_11IQ_0231/18/487:489,
1/18/511:512		Single bulged U
homologous
IL_9PN5_164
IL_97561.7
IL_11IQ_0241/18/491:495,
1/18/508:509		No text annotation
homologous
IL_9PN5_165
IL_26900.3
IL_11IQ_0251/18/495:496,
1/18/506:508		Single bulged G
homologous
IL_9H3G_180
IL_28408.4
IL_11IQ_0271/18/535:538,
1/18/545:549		No text annotation
IL_11IQ_0281/18/563:565,
1/18/585:592		No text annotation
homologous
IL_9H3G_182
IL_02511.3
IL_11IQ_0291/18/566:569,
1/18/581:584		Tandem non-canonical cWW pairs
geometric
IL_8GLP_220
IL_71194.4
IL_11IQ_0301/18/599:608,
1/18/635:637		No text annotation
IL_11IQ_0311/18/611:617,
1/18/624:632		Kink-turn related
homologous
IL_9H3G_187
IL_52042.3
IL_11IQ_0321/18/663:665,
1/18/1162:1164		Isolated non-canonical cWW pair
homologous
IL_9H3G_188
IL_01003.6
IL_11IQ_0331/18/665:671,
1/18/1161:1162		No text annotation
homologous
IL_9PN5_174
IL_20847.3
IL_11IQ_0341/18/673:675,
1/18/1030:1032		Isolated non-canonical cWW pair
homologous
IL_9H3G_190
IL_01003.6
IL_11IQ_0351/18/676:680,
1/18/1025:1029		No text annotation
homologous
IL_9PN5_176
IL_05821.3
IL_11IQ_0361/18/802:803,
1/18/860:863		No text annotation
homologous
IL_9PN5_178
IL_73108.4
IL_11IQ_0371/18/805:807,
1/18/856:858		Isolated non-canonical cWW pair
homologous
IL_9PN5_179
IL_71625.5
IL_11IQ_0381/18/807:815,
1/18/849:856		No text annotation
homologous
IL_9H3G_194
IL_59049.4
IL_11IQ_0391/18/874:876,
1/18/910:912		Isolated non-canonical cWW pair
geometric
IL_8CRE_425
IL_01003.6
IL_11IQ_0401/18/877:879,
1/18/907:909		No text annotation
homologous
IL_9H3G_195
NA
IL_11IQ_0411/18/922:923,
1/18/1019:1022		Major groove platform; stack outside cWW
geometric
IL_8GLP_235
IL_74641.4
IL_11IQ_0421/18/925:926,
1/18/1015:1017		Single bulged U
geometric
IL_6UFH_004
IL_97561.7
IL_11IQ_0431/18/928:931,
1/18/1010:1013		Tandem non-canonical cWW pairs
homologous
IL_9PN5_184
IL_15225.4
IL_11IQ_0441/18/931:935,
1/18/1007:1010		Tandem non-canonical cWW pairs
homologous
IL_9PN5_185
IL_15225.4
IL_11IQ_0451/18/942:945,
1/18/981:984		Tandem non-canonical cWW pairs
homologous
IL_9PN5_186
IL_15225.4
IL_11IQ_0461/18/952:956,
1/18/967:974		Kink-turn
homologous
IL_9H3G_202
IL_71972.2
IL_11IQ_0471/18/1042:1047,
1/18/1071:1073		No text annotation
homologous
IL_9H3G_203
IL_31690.1
IL_11IQ_0481/18/1047:1051,
1/18/1067:1071		No text annotation
homologous
IL_9PN5_190
IL_05821.3
IL_11IQ_0491/18/1091:1093,
1/18/1152:1158		No text annotation
homologous
IL_9H3G_205
IL_82706.4
IL_11IQ_0501/18/1098:1103,
1/18/1129:1134		Tandem non-canonical cWW pairs with near WC pairs
geometric
IL_4EYA_005
IL_82292.3
IL_11IQ_0511/18/1108:1110,
1/18/1123:1124		Minor groove platform
geometric
IL_8GLP_246
IL_41261.1
IL_11IQ_0521/18/1168:1175,
1/18/1186:1191		8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_9PN5_194
IL_84044.3
IL_11IQ_0531/18/1203:1204,
1/18/1694:1696		Single bulged A
homologous
IL_9PN5_195
IL_14190.4
IL_11IQ_0541/18/1205:1211,
1/18/1689:1693		No text annotation
IL_11IQ_0551/18/1211:1212,
1/18/1687:1689		Single stack bend
geometric
IL_9PN5_069
IL_15011.5
IL_11IQ_0561/18/1214:1217,
1/18/1681:1685		No text annotation
homologous
IL_9PN5_197
IL_63596.14
IL_11IQ_0571/18/1230:1232,
1/18/1526:1528		Isolated non-canonical cWW pair
homologous
IL_9H3G_213
IL_01003.6
IL_11IQ_0581/18/1235:1236,
1/18/1521:1523		Minor groove platform
homologous
IL_9H3G_214
IL_98469.1
IL_11IQ_0591/18/1270:1272,
1/18/1510:1512		Isolated non-canonical cWW pair
homologous
IL_9H3G_215
IL_01003.6
IL_11IQ_0601/18/1281:1287,
1/18/1314:1316		No text annotation
IL_11IQ_0611/18/1281:1290,
1/18/1309:1316		No text annotation
IL_11IQ_0621/18/1287:1290,
1/18/1309:1314		No text annotation
IL_11IQ_0641/18/1325:1327,
1/18/1502:1503		Single bulged U
homologous
IL_9PN5_203
IL_97561.7
IL_11IQ_0651/18/1329:1333,
1/18/1498:1500		No text annotation
geometric
IL_9PN5_204
IL_82453.3
IL_11IQ_0661/18/1329:1335,
1/18/1492:1500		No text annotation
IL_11IQ_0671/18/1333:1335,
1/18/1492:1498		No text annotation
homologous
IL_9H3G_221
IL_09439.2
IL_11IQ_0681/18/1337:1338,
1/18/1488:1490		Single bulged A
homologous
IL_9H3G_222
IL_14190.4
IL_11IQ_0691/18/1347:1349,
1/18/1380:1382		Isolated cWH basepair
homologous
IL_9H3G_223
IL_10892.4
IL_11IQ_0701/18/1363:1365,
1/18/1374:1375		Minor groove platform
homologous
IL_9PN5_211
IL_41261.1
IL_11IQ_0711/18/1402:1405,
1/18/1441:1444		No text annotation
homologous
IL_9H3G_226
IL_78800.4
IL_11IQ_0721/18/1412:1413,
1/18/1427:1429		Single bulged G
geometric
IL_8GLP_268
IL_28408.4
IL_11IQ_0731/18/1537:1539,
1/18/1594:1596		Isolated non-canonical cWW pair
geometric
IL_5MWI_003
IL_01003.6
IL_11IQ_0741/18/1541:1550,
1/18/1582:1592		No text annotation
IL_11IQ_0751/18/1550:1558,
1/18/1577:1582		No text annotation
IL_11IQ_0761/18/1560:1562,
1/18/1573:1575		No text annotation
homologous
IL_9H3G_231
IL_01334.1
IL_11IQ_0771/18/1604:1610,
1/18/1629:1635		No text annotation
IL_11IQ_0781/18/1700:1702,
1/18/1833:1836		No text annotation
homologous
IL_9PN5_220
IL_18228.3
IL_11IQ_0791/18/1702:1705,
1/18/1829:1833		No text annotation
homologous
IL_9PN5_221
IL_25873.4
IL_11IQ_0801/18/1706:1708,
1/18/1826:1828		Isolated non-canonical cWW pair
homologous
IL_9PN5_222
IL_01003.6
IL_11IQ_0811/18/1708:1711,
1/18/1822:1826		No text annotation
homologous
IL_9PN5_223
IL_37443.2
IL_11IQ_0821/18/1714:1716,
1/18/1817:1819		Isolated non-canonical cWW pair
homologous
IL_9PN5_224
IL_01003.6
IL_11IQ_0831/18/1717:1720,
1/18/1813:1816		Double sheared
homologous
IL_9H3G_238
IL_58355.4
IL_11IQ_0841/18/1720:1722,
1/18/1812:1813		Single bulged U
homologous
IL_9PN5_226
IL_97561.7
IL_11IQ_0851/18/1729:1731,
1/18/1803:1805		No text annotation
homologous
IL_9PN5_227
IL_55553.3
IL_11IQ_0861/18/1733:1736,
1/18/1798:1801		Double sheared
homologous
IL_9H3G_241
IL_58355.4
IL_11IQ_0871/18/1739:1741,
1/18/1793:1795		Isolated non-canonical cWW pair
geometric
IL_4E48_003
IL_01003.6
IL_11IQ_0881/18/1742:1746,
1/18/1788:1792		No text annotation
homologous
IL_9PN5_231
IL_15190.4
IL_11IQ_0911/28/6:7,
1/58/149:151		Single bulged C
homologous
IL_8GLP_001
IL_05642.5
IL_11IQ_0921/28/12:14,
1/58/143:144		Single bulged U
homologous
IL_8GLP_002
IL_97561.7
IL_11IQ_0931/28/16:18,
1/58/139:141		Isolated non-canonical cWW pair
homologous
IL_8GLP_003
IL_01003.6
IL_11IQ_0941/28/26:27,
1/28/55:57		Single stack bend
homologous
IL_8GLP_004
IL_15011.5
IL_11IQ_0951/28/30:37,
1/28/44:52		9x8 Sarcin-Ricin; G-bulge
homologous
IL_8GLP_005
IL_93502.3
IL_11IQ_0961/28/81:88,
1/28/96:102		8x7 Sarcin-Ricin; G-bulge
homologous
IL_8GLP_006
IL_62167.5
IL_11IQ_0971/28/118:121,
1/28/152:153		No text annotation
geometric
IL_8GLP_007
IL_36175.2
IL_11IQ_0981/28/118:122,
1/28/147:153		Kink-turn with embedded cWW pair
geometric
IL_8GLP_287
IL_65996.1
IL_11IQ_0991/28/121:122,
1/28/147:152		No text annotation
homologous
IL_8GLP_008
IL_10396.3
IL_11IQ_1001/28/125:126,
1/28/142:144		Single bulged C
homologous
IL_8GLP_009
IL_05642.5
IL_11IQ_1011/28/168:173,
1/28/263:267		No text annotation
IL_11IQ_1021/28/195:196,
1/28/244:246		Single bulged C
homologous
IL_8GLP_015
IL_05642.5
IL_11IQ_1031/28/199:201,
1/28/214:215		Single bulged U
homologous
IL_8GLP_016
IL_97561.7
IL_11IQ_1041/28/339:342,
1/58/32:33		Minor groove platform
homologous
IL_8GLP_017
IL_41261.1
IL_11IQ_1051/28/348:350,
1/58/25:26		Single bulged A
homologous
IL_8GLP_018
IL_14190.4
IL_11IQ_1061/28/387:390,
1/28/401:414		No text annotation
geometric
IL_8GLP_019
IL_44923.3
IL_11IQ_1071/28/415:421,
1/58/13:19		No text annotation
homologous
IL_8GLP_021
IL_22311.3
IL_11IQ_1081/28/443:446,
1/28/1300:1304		No text annotation
IL_11IQ_1091/28/448:450,
1/28/1297:1298		Single bulged C
geometric
IL_8GLP_083
IL_05642.5
IL_11IQ_1101/28/459:460,
1/28/695:697		Single bulged C
homologous
IL_8GLP_024
IL_05642.5
IL_11IQ_1111/28/461:464,
1/28/691:694		Tandem non-canonical cWW pairs
geometric
IL_8B0X_103
IL_15225.4
IL_11IQ_1121/28/466:472,
1/28/682:689		No text annotation
IL_11IQ_1131/28/481:482,
1/28/672:673		Single bulged C
geometric
IL_7KGA_004
IL_05642.5
IL_11IQ_1141/28/482:485,
1/28/671:672		No text annotation
IL_11IQ_1151/28/487:488,
1/28/665:669		Multiple bulged bases
geometric
IL_1R3E_001
IL_09092.1
IL_11IQ_1161/28/491:493,
1/28/661:662		Single bulged U
geometric
IL_4WF9_030
IL_97561.7
IL_11IQ_1171/28/508:510,
1/28/649:650		Single bulged A
homologous
IL_8GLP_032
IL_14190.4
IL_11IQ_1191/28/709:710,
1/28/1286:1288		Single bulged G
geometric
IL_8GLP_034
IL_28408.4
IL_11IQ_1201/28/723:724,
1/28/942:945		No text annotation
geometric
IL_8GLP_035
IL_09092.1
IL_11IQ_1211/28/727:731,
1/28/938:939		No text annotation
geometric
IL_8GLP_036
IL_75501.2
IL_11IQ_1221/28/732:735,
1/28/928:937		No text annotation
IL_11IQ_1231/28/737:739,
1/28/923:926		No text annotation
geometric
IL_8GLP_038
IL_44609.4
IL_11IQ_1241/28/745:752,
1/28/911:919		No text annotation
geometric
IL_8GLP_040
IL_25001.2
IL_11IQ_1251/28/1082:1084,
1/28/1213:1217		No text annotation
geometric
IL_8GLP_043
IL_84227.1
IL_11IQ_1261/28/1086:1087,
1/28/1209:1211		Single bulged C
geometric
IL_8GLP_044
IL_05642.5
IL_11IQ_1281/28/1173:1175,
1/28/1186:1188		Isolated cWH basepair
geometric
IL_8GLP_047
IL_10892.4
IL_11IQ_1291/28/1357:1360,
1/28/1379:1382		No text annotation
IL_11IQ_1301/28/1357:1361,
1/28/1376:1382		No text annotation
IL_11IQ_1311/28/1360:1361,
1/28/1376:1379		No text annotation
homologous
IL_8GLP_050
IL_73464.3
IL_11IQ_1321/28/1425:1429,
1/28/1455:1460		No text annotation
homologous
IL_8GLP_051
IL_47352.3
IL_11IQ_1331/28/1431:1434,
1/28/1450:1453		Double sheared
homologous
IL_8GLP_052
IL_58355.4
IL_11IQ_1341/28/1467:1468,
1/28/1496:1498		Single bulged A
homologous
IL_8GLP_053
IL_14190.4
IL_11IQ_1351/28/1474:1476,
1/28/1489:1490		Single stack bend
homologous
IL_8GLP_054
IL_15011.5
IL_11IQ_1361/28/1520:1522,
1/28/1655:1657		Isolated non-canonical cWW pair
homologous
IL_8GLP_289
IL_01003.6
IL_11IQ_1371/28/1522:1526,
1/28/1648:1655		No text annotation
homologous
IL_8GLP_290
IL_73855.3
IL_11IQ_1381/28/1550:1551,
1/28/1576:1578		Single bulged G
homologous
IL_8GLP_058
IL_28408.4
IL_11IQ_1391/28/1551:1555,
1/28/1572:1576		No text annotation
homologous
IL_8GLP_059
IL_15190.4
IL_11IQ_1401/28/1586:1589,
1/28/1605:1607		No text annotation
homologous
IL_8GLP_060
IL_36931.4
IL_11IQ_1411/28/1590:1592,
1/28/1603:1604		Single bulged U
homologous
IL_8GLP_061
IL_97561.7
IL_11IQ_1421/28/1624:1626,
1/28/1636:1640		No text annotation
homologous
IL_8GLP_062
IL_89509.3
IL_11IQ_1431/28/1671:1673,
1/28/1682:1684		Isolated non-canonical cWW pair
homologous
IL_9H3G_040
IL_71625.5
IL_11IQ_1441/28/1686:1688,
1/28/1848:1851		No text annotation
homologous
IL_8GLP_064
IL_16315.2
IL_11IQ_1451/28/1723:1725,
1/28/1838:1839		Single bulged G
homologous
IL_8GLP_066
IL_28408.4
IL_11IQ_1461/28/1732:1737,
1/28/1792:1797		No text annotation
homologous
IL_8GLP_291
IL_46203.1
IL_11IQ_1471/28/1737:1738,
1/28/1790:1792		Minor groove platform
homologous
IL_9AXU_038
IL_41261.1
IL_11IQ_1481/28/1739:1744,
1/28/1786:1789		No text annotation
homologous
IL_9H3G_046
IL_16301.3
IL_11IQ_1491/28/1746:1749,
1/28/1781:1784		Tandem non-canonical cWW pairs
homologous
IL_9H3G_047
IL_71194.4
IL_11IQ_1501/28/1749:1751,
1/28/1779:1781		Isolated non-canonical cWW pair
homologous
IL_9PN5_041
IL_01003.6
IL_11IQ_1511/28/1753:1756,
1/28/1776:1777		No text annotation
IL_11IQ_1531/28/1814:1816,
1/28/1823:1824		Single bulged G
homologous
IL_8GLP_072
IL_28408.4
IL_11IQ_1541/28/1858:1860,
1/28/1874:1876		Isolated non-canonical cWW pair
homologous
IL_9H3G_052
IL_01003.6
IL_11IQ_1561/28/1905:1909,
1/28/2067:2071		UAA/GAN
homologous
IL_8GLP_075
IL_08938.3
IL_11IQ_1571/28/1911:1918,
1/28/2064:2065		No text annotation
homologous
IL_8GLP_076
IL_11411.3
IL_11IQ_1581/28/1918:1920,
1/28/2063:2064		Single bulged G
homologous
IL_8GLP_077
IL_28408.4
IL_11IQ_1591/28/1920:1922,
1/28/2062:2063		Single bulged C
homologous
IL_8GLP_078
IL_05642.5
IL_11IQ_1601/28/1926:1933,
1/28/2053:2058		No text annotation
homologous
IL_8GLP_079
IL_39054.3
IL_11IQ_1611/28/1933:1944,
1/28/2038:2053		No text annotation
homologous
IL_8GLP_080
IL_34501.3
IL_11IQ_1621/28/1946:1948,
1/28/2035:2036		Single bulged U
homologous
IL_8GLP_081
IL_97561.7
IL_11IQ_1631/28/1957:1965,
1/28/2022:2026		Kink-turn
homologous
IL_8GLP_082
IL_99692.4
IL_11IQ_1641/28/1973:1977,
1/28/1989:1993		No text annotation
homologous
IL_9AXU_052
NA
IL_11IQ_1651/28/2001:2005,
1/28/2014:2016		No text annotation
geometric
IL_1MMS_004
IL_36931.4
IL_11IQ_1661/28/2083:2085,
1/28/2272:2273		Single bulged C
homologous
IL_8GLP_083
IL_05642.5
IL_11IQ_1671/28/2290:2292,
1/28/2342:2345		No text annotation
homologous
IL_8GLP_084
IL_84227.1
IL_11IQ_1681/28/2299:2301,
1/28/2334:2335		Single bulged A
homologous
IL_8GLP_085
IL_14190.4
IL_11IQ_1691/28/2302:2309,
1/28/2329:2333		Kink-turn
homologous
IL_8GLP_086
IL_90775.3
IL_11IQ_1701/28/2312:2314,
1/28/2325:2326		Single bulged A
homologous
IL_8GLP_087
IL_14190.4
IL_11IQ_1711/28/2358:2364,
1/28/3858:3863		7x6 Sarcin-Ricin; G-bulge
homologous
IL_8GLP_300
IL_02666.3
IL_11IQ_1721/28/2415:2419,
1/28/2427:2429		No text annotation
homologous
IL_8GLP_301
IL_06671.3
IL_11IQ_1731/28/2446:2450,
1/28/2509:2514		UAA/GAN
homologous
IL_8GLP_091
IL_08938.3
IL_11IQ_1741/28/2477:2479,
1/28/2499:2500		Minor groove platform
homologous
IL_8GLP_092
IL_41261.1
IL_11IQ_1751/28/2542:2547,
1/28/2772:2774		No text annotation
homologous
IL_9AXU_061
IL_75527.4
IL_11IQ_1761/28/2549:2550,
1/28/2768:2770		Single bulged U
homologous
IL_8GLP_095
IL_97561.7
IL_11IQ_1771/28/2589:2593,
1/28/2752:2756		No text annotation
homologous
IL_8GLP_096
IL_15190.4
IL_11IQ_1781/28/2613:2614,
1/28/2724:2726		Single bulged A
homologous
IL_8GLP_097
IL_14190.4
IL_11IQ_1791/28/2614:2615,
1/28/2722:2724		Single stack bend
homologous
IL_8GLP_098
IL_15011.5
IL_11IQ_1801/28/2646:2648,
1/28/2685:2688		No text annotation
homologous
IL_8GLP_099
IL_87316.4
IL_11IQ_1811/28/2651:2653,
1/28/2681:2682		Single bulged G
homologous
IL_8GLP_100
IL_28408.4
IL_11IQ_1821/28/2656:2662,
1/28/2672:2678		No text annotation
homologous
IL_8GLP_101
IL_93476.3
IL_11IQ_1831/28/2704:2705,
1/28/2710:2712		Single bulged G
homologous
IL_8GLP_102
IL_28408.4
IL_11IQ_1841/28/2832:2838,
1/28/3850:3853		No text annotation
homologous
IL_9PN5_072
IL_89862.3
IL_11IQ_1851/28/2844:2846,
1/28/3842:3844		No text annotation
homologous
IL_9H3G_084
IL_10432.3
IL_11IQ_1861/28/2847:2850,
1/28/3840:3841		Major groove platform; stack outside cWW
geometric
IL_8GLP_304
IL_74641.4
IL_11IQ_1871/28/2847:2855,
1/28/3837:3841		No text annotation
geometric
IL_8GLP_305
IL_80252.3
IL_11IQ_1881/28/2850:2855,
1/28/3837:3840		No text annotation
homologous
IL_8GLP_107
IL_28217.3
IL_11IQ_1891/28/2867:2872,
1/28/2877:2883		No text annotation
homologous
IL_8GLP_108
IL_20700.3
IL_11IQ_1901/28/2889:2891,
1/28/3610:3612		Isolated non-canonical cWW pair
homologous
IL_8GLP_109
IL_01003.6
IL_11IQ_1911/28/2896:2897,
1/28/3602:3605		No text annotation
homologous
IL_8GLP_110
IL_18824.3
IL_11IQ_1921/28/3632:3633,
1/28/3827:3829		Single bulged A
homologous
IL_8GLP_113
IL_14190.4
IL_11IQ_1931/28/3660:3665,
1/28/3677:3684		No text annotation
homologous
IL_8GLP_114
IL_14684.3
IL_11IQ_1941/28/3700:3703,
1/28/3749:3750		No text annotation
homologous
IL_9AXU_080
IL_55206.3
IL_11IQ_1951/28/3704:3705,
1/28/3745:3748		No text annotation
homologous
IL_8GLP_117
IL_71421.5
IL_11IQ_1961/28/3708:3714,
1/28/3739:3742		No text annotation
homologous
IL_9PN5_084
IL_89862.3
IL_11IQ_1971/28/3715:3721,
1/28/3732:3738		No text annotation
homologous
IL_9H3G_097
IL_65359.3
IL_11IQ_1981/28/3780:3781,
1/28/3811:3814		No text annotation
geometric
IL_9AXU_083
IL_24886.4
IL_11IQ_1991/28/3781:3792,
1/28/3808:3811		No text annotation
homologous
IL_8GLP_307
IL_84014.3
IL_11IQ_2001/28/3895:3898,
1/28/4563:4565		No text annotation
homologous
IL_8GLP_127
IL_75527.4
IL_11IQ_2011/28/3900:3902,
1/28/4558:4561		No text annotation
homologous
IL_8GLP_129
IL_80025.3
IL_11IQ_2021/28/3913:3915,
1/28/4388:4389		Single bulged U
homologous
IL_8GLP_130
IL_97561.7
IL_11IQ_2031/28/3916:3917,
1/28/4384:4387		Minor groove platform
homologous
IL_8GLP_131
IL_98469.1
IL_11IQ_2041/28/3927:3929,
1/28/4181:4184		No text annotation
homologous
IL_8GLP_133
IL_87316.4
IL_11IQ_2051/28/4082:4088,
1/28/4161:4164		No text annotation
homologous
IL_8GLP_135
IL_52092.3
IL_11IQ_2061/28/4095:4097,
1/28/4112:4113		Single stack bend
geometric
IL_9DFE_005
IL_15011.5
IL_11IQ_2071/28/4191:4192,
1/28/4202:4204		AG tHS outside loop
homologous
IL_8GLP_137
IL_14190.4
IL_11IQ_2081/28/4243:4245,
1/28/4263:4267		No text annotation
homologous
IL_8GLP_138
IL_14250.3
IL_11IQ_2091/28/4291:4293,
1/28/4317:4318		Single bulged A
geometric
IL_9AXU_093
IL_14190.4
IL_11IQ_2101/28/4295:4298,
1/28/4312:4315		Tandem non-canonical cWW pairs
homologous
IL_9AXU_094
IL_15225.4
IL_11IQ_2111/28/4347:4350,
1/28/4364:4365		No text annotation
homologous
IL_9H3G_115
IL_57267.1
IL_11IQ_2121/28/4400:4403,
1/28/4440:4444		No text annotation
homologous
IL_9PN5_098
IL_60246.1
IL_11IQ_2131/28/4403:4405,
1/28/4439:4440		No text annotation
homologous
IL_9H3G_118
IL_46637.4
IL_11IQ_2141/28/4405:4407,
1/28/4435:4439		No text annotation
homologous
IL_8GLP_143
IL_36931.4
IL_11IQ_2151/28/4412:4416,
1/28/4426:4430		No text annotation
homologous
IL_9PN5_101
IL_87767.4
IL_11IQ_2161/28/4453:4454,
1/28/4526:4528		No text annotation
homologous
IL_8GLP_146
IL_46637.4
IL_11IQ_2171/28/4456:4458,
1/28/4520:4524		No text annotation
homologous
IL_9PN5_103
IL_30722.1
IL_11IQ_2181/28/4458:4459,
1/28/4517:4520		No text annotation
homologous
IL_8GLP_148
IL_44609.4
IL_11IQ_2191/28/4466:4468,
1/28/4489:4491		Isolated non-canonical cWW pair
geometric
IL_8OI5_110
IL_01003.6
IL_11IQ_2201/28/4466:4470,
1/28/4485:4491		No text annotation
geometric
IL_8GLP_315
IL_56912.1
IL_11IQ_2211/28/4468:4470,
1/28/4485:4489		No text annotation
homologous
IL_8GLP_150
IL_09353.2
IL_11IQ_2221/28/4495:4497,
1/28/4503:4505		Isolated non-canonical cWW pair
homologous
IL_8GLP_152
IL_01003.6
IL_11IQ_2231/28/4537:4538,
1/28/4547:4549		Single bulged A
homologous
IL_8GLP_154
IL_14190.4
IL_11IQ_2241/28/4580:4582,
1/28/4721:4723		Isolated cWH basepair
homologous
IL_8GLP_157
IL_10892.4
IL_11IQ_2251/28/4582:4585,
1/28/4717:4721		No text annotation
homologous
IL_8GLP_158
IL_46211.1
IL_11IQ_2261/28/4590:4592,
1/28/4618:4620		Isolated non-canonical cWW pair
homologous
IL_8GLP_316
IL_71625.5
IL_11IQ_2271/28/4596:4603,
1/28/4608:4614		Sarcin-Ricin target in LSU H95; G-bulge
homologous
IL_8GLP_159
IL_34443.1
IL_11IQ_2281/28/4624:4629,
1/28/4669:4673		No text annotation
homologous
IL_8GLP_317
IL_31690.1
IL_11IQ_2291/28/4632:4637,
1/28/4662:4666		No text annotation
homologous
IL_8GLP_318
IL_43276.1
IL_11IQ_2301/28/4638:4640,
1/28/4659:4661		Isolated cWH basepair
homologous
IL_8GLP_162
IL_10892.4
IL_11IQ_2311/28/4641:4642,
1/28/4655:4658		No text annotation
homologous
IL_8GLP_163
IL_44609.4
IL_11IQ_2321/28/4680:4685,
1/28/4705:4710		No text annotation
homologous
IL_8GLP_164
IL_91079.1
IL_11IQ_2331/28/4756:4766,
1/28/4868:4877		No text annotation
IL_11IQ_2341/28/4769:4771,
1/28/4863:4865		Isolated non-canonical cWW pair
homologous
IL_8GLP_169
IL_71625.5
IL_11IQ_2351/28/4771:4773,
1/28/4862:4863		No text annotation
IL_11IQ_2361/28/4885:4888,
1/28/4931:4934		Tandem non-canonical cWW pairs
geometric
IL_8OI5_126
IL_71194.4
IL_11IQ_2371/28/4890:4896,
1/28/4924:4929		No text annotation
IL_11IQ_2381/28/4972:4975,
1/28/4983:4986		Tandem non-canonical cWW pairs
homologous
IL_9H3G_140
IL_71194.4
IL_11IQ_2391/28/4992:4994,
1/28/5057:5059		Isolated non-canonical cWW pair
homologous
IL_8GLP_173
IL_01003.6
IL_11IQ_2401/28/4996:4997,
1/28/5053:5055		Single bulged C
geometric
IL_1KUQ_002
IL_05642.5
IL_11IQ_2411/28/5000:5002,
1/28/5045:5050		No text annotation
homologous
IL_9H3G_143
IL_00086.3
IL_11IQ_2421/28/5003:5009,
1/28/5039:5044		No text annotation
homologous
IL_8GLP_176
NA
IL_11IQ_2431/28/5012:5014,
1/28/5035:5036		Single bulged C
homologous
IL_8GLP_178
IL_05642.5
IL_11IQ_2441/28/5014:5017,
1/28/5032:5035		Double sheared; A in syn
geometric
IL_8OI5_132
IL_58355.4
IL_11IQ_2451/5/15:16,
1/5/62:64		Single bulged C
homologous
IL_8QYX_165
IL_05642.5
IL_11IQ_2461/5/21:27,
1/5/52:57		No text annotation
homologous
IL_8QYX_166
IL_41504.2
IL_11IQ_2471/5/28:29,
1/5/48:51		No text annotation
homologous
IL_8QYX_167
IL_73108.4
IL_11IQ_2481/5/32:36,
1/5/41:45		Symmetric double minor groove platform
homologous
IL_8QYX_168
IL_58103.14
IL_11IQ_2491/5/71:78,
1/5/98:104		8x7 Sarcin-Ricin; G-bulge
homologous
IL_8QYX_169
IL_62879.1
IL_11IQ_2501/5/79:81,
1/5/95:97		No text annotation
homologous
IL_8QYX_170
IL_01334.1
IL_11IQ_2511/5/82:85,
1/5/92:94		Isolated non-canonical cWW pair
homologous
IL_8QYX_171
IL_01003.6
IL_11IQ_2521/58/64:66,
1/58/92:95		No text annotation
homologous
IL_8GLP_187
IL_30722.1

Problematic loops

#loop idProblemSequence
IL_11IQ_007No text annotation
IL_11IQ_012Isolated cWH basepair
IL_11IQ_013Double sheared with non-canonical cWW
IL_11IQ_017No text annotation
IL_11IQ_026Single bulged A
IL_11IQ_063No text annotation
IL_11IQ_089No text annotation
IL_11IQ_090No text annotation
IL_11IQ_118Single stack bend
IL_11IQ_127Single stack bend
IL_11IQ_152No text annotation
IL_11IQ_155No text annotation
IL_11IQ_253Isolated non-canonical cWW pair
IL_11IQ_254No text annotation
IL_11IQ_255No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_11IQ_0011/18/40:41,
1/18/481:487,
1/18/512:514		No text annotation
geometric
J3_8GLP_040
J3_58657.3
J3_11IQ_0021/18/40:47,
1/18/479:487,
1/18/512:514		No text annotation
homologous
J3_9PN5_028
J3_63856.3
J3_11IQ_0031/18/682:684,
1/18/918:922,
1/18/1022:1023		No text annotation
geometric
J3_9PN5_030
J3_01633.3
J3_11IQ_0041/18/682:684,
1/18/918:923,
1/18/1019:1023		No text annotation
homologous
J3_9PN5_031
J3_17385.7
J3_11IQ_0051/18/816:819,
1/18/829:831,
1/18/843:848		No text annotation
homologous
J3_9H3G_032
J3_97642.4
J3_11IQ_0061/18/938:941,
1/18/985:993,
1/18/1000:1004		No text annotation
homologous
J3_9H3G_033
NA
J3_11IQ_0071/18/1094:1096,
1/18/1136:1140,
1/18/1147:1151		No text annotation
homologous
J3_9H3G_034
NA
J3_11IQ_0081/18/1218:1221,
1/18/1645:1651,
1/18/1673:1680		No text annotation
homologous
J3_9H3G_035
J3_85722.3
J3_11IQ_0091/18/1225:1228,
1/18/1530:1532,
1/18/1638:1641		No text annotation
homologous
J3_9PN5_036
J3_44359.3
J3_11IQ_0101/18/1237:1244,
1/18/1255:1266,
1/18/1516:1520		No text annotation
homologous
J3_9PN5_037
J3_88451.3
J3_11IQ_0111/18/1272:1277,
1/18/1320:1324,
1/18/1504:1510		No text annotation
homologous
J3_9H3G_038
J3_87797.4
J3_11IQ_0121/18/1340:1345,
1/18/1384:1389,
1/18/1481:1486		No text annotation
homologous
J3_9PN5_039
NA
J3_11IQ_0131/18/1350:1351,
1/18/1360:1363,
1/18/1375:1379		No text annotation
homologous
J3_9PN5_040
J3_76043.6
J3_11IQ_0141/18/1391:1399,
1/18/1447:1456,
1/18/1470:1479		No text annotation
J3_11IQ_0151/18/1532:1536,
1/18/1597:1604,
1/18/1635:1638		No text annotation
homologous
J3_9PN5_043
J3_03192.3
J3_11IQ_0161/28/112:116,
1/28/155:160,
1/28/275:278		No text annotation
homologous
J3_8GLP_001
NA
J3_11IQ_0171/28/196:199,
1/28/215:228,
1/28/240:244		No text annotation
J3_11IQ_0181/28/351:367,
1/28/374:379,
1/58/21:24		No text annotation
homologous
J3_8GLP_024
J3_07616.3
J3_11IQ_0191/28/380:387,
1/28/414:415,
1/58/19:20		No text annotation
geometric
J3_8GLP_025
J3_68715.3
J3_11IQ_0201/28/380:390,
1/28/401:415,
1/58/19:20		No text annotation
homologous
J3_8GLP_026
J3_17917.3
J3_11IQ_0211/28/451:455,
1/28/701:705,
1/28/1292:1296		No text annotation
J3_11IQ_0221/28/1531:1537,
1/28/1622:1624,
1/28/1640:1643		No text annotation
homologous
J3_9AXU_009
J3_46658.3
J3_11IQ_0231/28/1545:1548,
1/28/1580:1584,
1/28/1609:1614		No text annotation
J3_11IQ_0241/28/1726:1727,
1/28/1802:1806,
1/28/1832:1837		No text annotation
homologous
J3_8GLP_029
NA
J3_11IQ_0251/28/1969:1971,
1/28/1995:2001,
1/28/2016:2018		No text annotation
geometric
J3_5D8H_001
J3_37832.2
J3_11IQ_0261/28/2393:2399,
1/28/2805:2807,
1/28/2819:2822		No text annotation
homologous
J3_8GLP_004
J3_05025.3
J3_11IQ_0271/28/2402:2405,
1/28/2785:2791,
1/28/2800:2802		No text annotation
homologous
J3_9AXU_014
J3_76012.3
J3_11IQ_0281/28/2440:2445,
1/28/2515:2519,
1/28/2536:2537		No text annotation
homologous
J3_8GLP_030
J3_94309.3
J3_11IQ_0291/28/2451:2456,
1/28/2465:2476,
1/28/2501:2508		No text annotation
J3_11IQ_0301/28/2551:2555,
1/28/2572:2575,
1/28/2757:2767		No text annotation
homologous
J3_8GLP_006
NA
J3_11IQ_0311/28/2575:2576,
1/28/2585:2589,
1/28/2756:2757		No text annotation
homologous
J3_8GLP_032
J3_05348.3
J3_11IQ_0321/28/2598:2602,
1/28/2737:2738,
1/28/2742:2747		No text annotation
homologous
J3_9H3G_020
J3_08594.3
J3_11IQ_0331/28/3937:3939,
1/28/4074:4078,
1/28/4168:4173		No text annotation
J3_11IQ_0341/28/4091:4094,
1/28/4114:4129,
1/28/4155:4158		No text annotation
homologous
J3_8GLP_008
NA
J3_11IQ_0351/28/4228:4230,
1/28/4331:4342,
1/28/4370:4375		No text annotation
homologous
J3_8GLP_034
J3_04772.3
J3_11IQ_0361/28/4241:4243,
1/28/4267:4269,
1/28/4278:4283		No text annotation
homologous
J3_8GLP_009
J3_05327.3
J3_11IQ_0371/28/4463:4466,
1/28/4491:4493,
1/28/4507:4513		No text annotation
homologous
J3_9PN5_022
J3_44047.3
J3_11IQ_0381/28/4749:4754,
1/28/4879:4883,
1/28/4936:4951		No text annotation
J3_11IQ_0391/28/4970:4972,
1/28/4986:4991,
1/28/5060:5063		No text annotation
homologous
J3_8GLP_037
NA
J3_11IQ_0401/5/9:14,
1/5/65:66,
1/5/109:110		No text annotation
homologous
J3_8QYX_024
J3_26985.3
J3_11IQ_0411/58/44:45,
1/58/58:64,
1/58/95:99		No text annotation
homologous
J3_8GLP_039
J3_01004.3
J4_11IQ_0011/18/98:106,
1/18/355:357,
1/18/405:409,
1/18/431:432		No text annotation
homologous
J4_9PN5_010
J4_15241.4
J4_11IQ_0021/18/671:673,
1/18/1032:1037,
1/18/1078:1089,
1/18/1160:1161		No text annotation
homologous
J4_9PN5_011
J4_14595.3
J4_11IQ_0031/28/111:112,
1/28/278:283,
1/28/304:310,
1/28/327:330		No text annotation
homologous
J4_8GLP_001
J4_94698.3
J4_11IQ_0041/28/196:199,
1/28/215:222,
1/28/226:228,
1/28/240:244		No text annotation
J4_11IQ_0051/28/2365:2371,
1/28/2389:2391,
1/28/2824:2829,
1/28/3856:3857		No text annotation
homologous
J4_8GLP_004
NA
J4_11IQ_0061/28/2406:2410,
1/28/2434:2439,
1/28/2538:2539,
1/28/2777:2784		No text annotation
homologous
J4_9PN5_004
J4_17758.1
J4_11IQ_0071/28/2618:2619,
1/28/2637:2642,
1/28/2692:2698,
1/28/2718:2719		No text annotation
homologous
J4_8GLP_008
NA
J4_11IQ_0081/28/3634:3638,
1/28/3650:3654,
1/28/3690:3694,
1/28/3821:3826		No text annotation
homologous
J4_9AXU_007
J4_78485.3
J4_11IQ_0091/28/3696:3698,
1/28/3752:3753,
1/28/3771:3780,
1/28/3814:3819		No text annotation
homologous
J4_8GLP_010
J4_21738.1
J4_11IQ_0101/28/4231:4235,
1/28/4289:4291,
1/28/4318:4319,
1/28/4328:4330		No text annotation
J4_11IQ_0111/28/4231:4235,
1/28/4289:4293,
1/28/4317:4319,
1/28/4328:4330		No text annotation
homologous
J4_9H3G_010
J4_59590.3
J4_11IQ_0121/28/4587:4590,
1/28/4620:4621,
1/28/4676:4678,
1/28/4712:4715		No text annotation
homologous
J4_8GLP_013
J4_69783.1
J5_11IQ_0011/18/30:34,
1/18/521:527,
1/18/558:563,
1/18/592:595,
1/18/641:644		No text annotation
homologous
J5_9H3G_007
J5_04786.3
J5_11IQ_0021/18/30:34,
1/18/521:527,
1/18/558:565,
1/18/585:595,
1/18/641:644		No text annotation
J5_11IQ_0031/18/53:56,
1/18/89:96,
1/18/434:436,
1/18/457:459,
1/18/470:474		No text annotation
homologous
J5_9PN5_009
J5_58574.3
J5_11IQ_0041/18/123:130,
1/18/182:185,
1/18/214:215,
1/18/310:312,
1/18/337:341		No text annotation
J5_11IQ_0051/28/19:21,
1/58/35:42,
1/58/101:106,
1/58/113:114,
1/58/136:138		No text annotation
homologous
J5_8GLP_001
J5_27223.3
J5_11IQ_0061/28/1335:1340,
1/28/1516:1519,
1/28/1658:1661,
1/28/2288:2290,
1/28/2345:2351		No text annotation
homologous
J5_8GLP_002
J5_08384.3
J5_11IQ_0071/28/2855:2863,
1/28/2887:2888,
1/28/3613:3614,
1/28/3618:3626,
1/28/3835:3837		No text annotation
homologous
J5_8GLP_003
J5_99177.3
J5_11IQ_0081/28/3903:3910,
1/28/4392:4400,
1/28/4444:4453,
1/28/4528:4534,
1/28/4552:4557		No text annotation
J5_11IQ_0091/28/3920:3923,
1/28/4188:4191,
1/28/4204:4205,
1/28/4227:4228,
1/28/4375:4381		No text annotation
homologous
J5_9H3G_006
J5_96125.3
J6_11IQ_0011/28/21:26,
1/28/57:67,
1/28/74:78,
1/28/105:109,
1/28/332:339,
1/58/33:35		No text annotation
J6_11IQ_0021/28/1352:1355,
1/28/1384:1388,
1/28/1395:1399,
1/28/1418:1421,
1/28/1464:1466,
1/28/1499:1504		No text annotation
homologous
J6_8GLP_002
NA
J6_11IQ_0031/28/3920:3923,
1/28/4188:4191,
1/28/4204:4205,
1/28/4227:4230,
1/28/4331:4342,
1/28/4370:4381		No text annotation
J7_11IQ_0011/28/1666:1671,
1/28/1684:1685,
1/28/1852:1855,
1/28/1879:1884,
1/28/1895:1899,
1/28/2077:2078,
1/28/2278:2283		No text annotation

Problematic loops

No problematic loops


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