HL_11IQ_031
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUCAUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 11IQ|1|18|C|1660, 11IQ|1|18|G|1665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11IQ_031 not in the Motif Atlas
- Homologous match to HL_9H3G_107
- Geometric discrepancy: 0.3203
- The information below is about HL_9H3G_107
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25307.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
11IQ|1|18|G|1658
11IQ|1|18|U|1659
11IQ|1|18|C|1660
11IQ|1|18|A|1661
11IQ|1|18|U|1662
11IQ|1|18|A|1663
11IQ|1|18|A|1664
11IQ|1|18|G|1665
11IQ|1|18|C|1666
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain II
- Small ribosomal subunit protein uS9
- Chain MM
- Small ribosomal subunit protein eS19
- Chain OO
- 40S ribosomal protein S20
- Chain XX
- 40S ribosomal protein S29
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