3D structure

PDB id
11IQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S with eEF2,eIF5A and SERBP1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGAGACCCG
Length
9 nucleotides
Bulged bases
11IQ|1|28|A|966, 11IQ|1|28|C|967
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

11IQ|1|28|C|962
11IQ|1|28|G|963
11IQ|1|28|A|964
11IQ|1|28|G|965
11IQ|1|28|A|966
11IQ|1|28|C|967
11IQ|1|28|C|968
11IQ|1|28|C|969
11IQ|1|28|G|970

Current chains

Chain 28
28S rRNA

Nearby chains

Chain L4
60S ribosomal protein L4
Chain L6
60S ribosomal protein L6
Chain L7
60S ribosomal protein L7

Coloring options:

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