HL_11IQ_062
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 11IQ|1|28|U|2530, 11IQ|1|28|C|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11IQ_062 not in the Motif Atlas
- Homologous match to HL_8GLP_038
- Geometric discrepancy: 0.0896
- The information below is about HL_8GLP_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.3
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
11IQ|1|28|G|2523
11IQ|1|28|U|2524
11IQ|1|28|U|2525
11IQ|1|28|C|2526
11IQ|1|28|A|2527
11IQ|1|28|G|2528
11IQ|1|28|A|2529
11IQ|1|28|U|2530
11IQ|1|28|C|2531
11IQ|1|28|C|2532
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 19
- 60S ribosomal protein L19
- Chain 34
- 60S ribosomal protein L34
- Chain EB
- Proliferation-associated protein 2G4
- Chain cc
- Large ribosomal subunit protein uL23
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