HL_11JJ_019
3D structure
- PDB id
- 11JJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11JJ_019 not in the Motif Atlas
- Homologous match to HL_9PN5_096
- Geometric discrepancy: 0.1064
- The information below is about HL_9PN5_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 456
Unit IDs
11JJ|1|18|C|994
11JJ|1|18|G|995
11JJ|1|18|A|996
11JJ|1|18|A|997
11JJ|1|18|A|998
11JJ|1|18|G|999
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain FF
- 40S ribosomal protein S13
- Chain UU
- eS26
Coloring options: