HL_11JJ_029

3D structure

PDB id

11JJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11JJ|1|18|C|1460
11JJ|1|18|G|1461
11JJ|1|18|U|1462
11JJ|1|18|U|1463
11JJ|1|18|C|1464
11JJ|1|18|A|1465
11JJ|1|18|G|1466

Current chains

Chain 18

18S rRNA

Nearby chains

Chain AA

Receptor of activated protein C kinase 1

Chain BB

40S_SA_C domain-containing protein

Chain RS

40S ribosomal protein S17