HL_11JJ_053

3D structure

PDB id

11JJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

11JJ|1|28|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11JJ|1|28|G|1761
11JJ|1|28|C|1762
11JJ|1|28|C|1763
11JJ|1|28|G|1764
11JJ|1|28|A|1765
11JJ|1|28|A|1766
11JJ|1|28|A|1767
11JJ|1|28|C|1768
11JJ|1|28|G|1769
11JJ|1|28|A|1770
11JJ|1|28|U|1771
11JJ|1|28|C|1772

Current chains

Chain 28

28S rRNA

Nearby chains

Chain A

Small ribosomal subunit protein uS19