HL_11KH_085
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUGGGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 11KH|1|28|U|4354
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11KH_085 not in the Motif Atlas
- Homologous match to HL_8GLP_065
- Geometric discrepancy: 0.3431
- The information below is about HL_8GLP_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14856.1
- Basepair signature
- cWW-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
11KH|1|28|U|4352
11KH|1|28|U|4353
11KH|1|28|U|4354
11KH|1|28|G|4355
11KH|1|28|G|4356
11KH|1|28|G|4357
11KH|1|28|U|4358
11KH|1|28|U|4359
11KH|1|28|U|4360
11KH|1|28|U|4361
11KH|1|28|A|4362
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 13
- Large ribosomal subunit protein eL13
- Chain 36
- 60S ribosomal protein L36
- Chain 42
- eL42
- Chain dd
- 60S ribosomal protein L27a
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