HL_1ASZ_007
3D structure
- PDB id
- 1ASZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- (PSU)AA(H2U)GG(H2U)CAG
- Length
- 10 nucleotides
- Bulged bases
- 1ASZ|1|R|G|617, 1ASZ|1|R|G|618, 1ASZ|1|R|H2U|619, 1ASZ|1|R|C|620
- QA status
- Modified nucleotides: PSU, H2U
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1ASZ_007 not in the Motif Atlas
- Geometric match to HL_1IL2_007
- Geometric discrepancy: 0.1998
- The information below is about HL_1IL2_007
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_45175.1
- Basepair signature
- cWW-cWS-F-F
- Number of instances in this motif group
- 5
Unit IDs
1ASZ|1|R|PSU|613
1ASZ|1|R|A|614
1ASZ|1|R|A|615
1ASZ|1|R|H2U|616
1ASZ|1|R|G|617
1ASZ|1|R|G|618
1ASZ|1|R|H2U|619
1ASZ|1|R|C|620
1ASZ|1|R|A|621
1ASZ|1|R|G|622
Current chains
- Chain R
- T-RNA (75-MER)
Nearby chains
- Chain A
- ASPARTYL-tRNA SYNTHETASE
Coloring options: