HL_1BZ3_002

3D structure

PDB id

1BZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

UUUUA

Length

5 nucleotides

Bulged bases

1BZ3|1|A|U|34, 1BZ3|1|A|U|35, 1BZ3|1|A|U|36

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1BZ3_002 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.3947

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

1BZ3|1|A|U|33
1BZ3|1|A|U|34
1BZ3|1|A|U|35
1BZ3|1|A|U|36
1BZ3|1|A|A|37

Current chains

Chain A

TRNA

Nearby chains