HL_1EXD_001

3D structure

PDB id

1EXD (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAAGCGGUAAG

Length

11 nucleotides

Bulged bases

1EXD|1|B|C|916, 1EXD|1|B|G|918

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1EXD_001 not in the Motif Atlas

Geometric match to HL_1QTQ_001

Geometric discrepancy: 0.386

The information below is about HL_1QTQ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55043.2

Basepair signature

cWW-tSH-cWS-F

Number of instances in this motif group

5

Unit IDs

1EXD|1|B|C|912
1EXD|1|B|A|913
1EXD|1|B|A|914
1EXD|1|B|G|915
1EXD|1|B|C|916
1EXD|1|B|G|918
1EXD|1|B|G|919
1EXD|1|B|U|920
1EXD|1|B|A|921
1EXD|1|B|A|922
1EXD|1|B|G|923

Current chains

Chain B

GLUTAMINE TRNA APTAMER

Nearby chains

Chain A

GLUTAMINYL-TRNA SYNTHETASE