HL_1F7V_001

3D structure

PDB id

1F7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCAA(H2U)GG(H2U)CACG

Length

12 nucleotides

Bulged bases

1F7V|1|B|G|917, 1F7V|1|B|G|918, 1F7V|1|B|C|920

QA status

Modified nucleotides: H2U

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1F7V_001 not in the Motif Atlas

Geometric match to HL_4JXZ_001

Geometric discrepancy: 0.2687

The information below is about HL_4JXZ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55043.2

Basepair signature

cWW-tSH-cWS-F

Number of instances in this motif group

5

Unit IDs

1F7V|1|B|C|912
1F7V|1|B|C|913
1F7V|1|B|A|914
1F7V|1|B|A|915
1F7V|1|B|H2U|916
1F7V|1|B|G|917
1F7V|1|B|G|918
1F7V|1|B|H2U|919
1F7V|1|B|C|920
1F7V|1|B|A|921
1F7V|1|B|C|922
1F7V|1|B|G|923

Current chains

Chain B

TRNA(ARG)

Nearby chains

Chain A

ARGINYL-TRNA SYNTHETASE