HL_1FFK_011
3D structure
- PDB id
- 1FFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUGGAUAUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1FFK_011 not in the Motif Atlas
- Homologous match to HL_4V9F_013
- Geometric discrepancy: 0.0767
- The information below is about HL_4V9F_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91228.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
1FFK|1|0|G|390
1FFK|1|0|U|391
1FFK|1|0|U|392
1FFK|1|0|G|393
1FFK|1|0|G|394
1FFK|1|0|A|395
1FFK|1|0|U|396
1FFK|1|0|A|397
1FFK|1|0|U|398
1FFK|1|0|C|399
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain I
- RIBOSOMAL PROTEIN L15E
- Chain J
- RIBOSOMAL PROTEIN L15
- Chain Z
- RIBOSOMAL PROTEIN L44E
Coloring options: