HL_1FG0_004

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

1FG0|1|A|G|2283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FG0_004 not in the Motif Atlas

Homologous match to HL_4V9F_055

Geometric discrepancy: 0.1426

The information below is about HL_4V9F_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

1FG0|1|A|C|2281
1FG0|1|A|U|2282
1FG0|1|A|G|2283
1FG0|1|A|G|2284
1FG0|1|A|G|2285
1FG0|1|A|G|2286
1FG0|1|A|C|2287
1FG0|1|A|G|2288
1FG0|1|A|G|2289

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains