3D structure

PDB id
1FG0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UGCAGAAG
Length
8 nucleotides
Bulged bases
1FG0|1|A|G|2564
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1FG0_012 not in the Motif Atlas
Homologous match to HL_4V9F_063
Geometric discrepancy: 0.0719
The information below is about HL_4V9F_063
Detailed Annotation
GNRA variation
Broad Annotation
GNRA variation
Motif group
HL_46665.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
15

Unit IDs

1FG0|1|A|U|2563
1FG0|1|A|G|2564
1FG0|1|A|C|2565
1FG0|1|A|A|2566
1FG0|1|A|G|2567
1FG0|1|A|A|2568
1FG0|1|A|A|2569
1FG0|1|A|G|2570

Current chains

Chain A
23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:


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