HL_1FHK_004

3D structure

PDB id

1FHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1FHK_004 not in the Motif Atlas

Geometric match to HL_4LFB_015

Geometric discrepancy: 0.2198

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

1FHK|4|A|C|3
1FHK|4|A|G|4
1FHK|4|A|G|5
1FHK|4|A|U|6
1FHK|4|A|G|7
1FHK|4|A|A|8
1FHK|4|A|A|9
1FHK|4|A|A|10
1FHK|4|A|U|11
1FHK|4|A|G|12

Current chains

Chain A

RNA (5'-R(*GP*GP*CP*GP*GP*UP*GP*AP*AP*AP*UP*GP*CP*C)-3')

Nearby chains