HL_4LFB_015

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12326.2

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

10

Unit IDs

4LFB|1|A|C|689
4LFB|1|A|G|690
4LFB|1|A|G|691
4LFB|1|A|U|692
4LFB|1|A|G|693
4LFB|1|A|A|694
4LFB|1|A|A|695
4LFB|1|A|A|696
4LFB|1|A|U|697
4LFB|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

ribosomal protein S7

Chain K

ribosomal protein S11