HL_1FJG_008

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88741.1

Basepair signature

cWW-cWW-R-R-tWH-R-tWH-R-R-R

Number of instances in this motif group

3

Unit IDs

1FJG|1|A|C|320
1FJG|1|A|A|321
1FJG|1|A|C|322
1FJG|1|A|U|323
1FJG|1|A|G|324
1FJG|1|A|A|325
1FJG|1|A|G|326
1FJG|1|A|A|327
1FJG|1|A|C|328
1FJG|1|A|A|329
1FJG|1|A|C|330
1FJG|1|A|G|331
1FJG|1|A|G|332
1FJG|1|A|G|333

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain P

30S RIBOSOMAL PROTEIN S16

Chain T

30S RIBOSOMAL PROTEIN S20