HL_1FKA_015
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- 1FKA|1|A|G|677
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1FKA_015 not in the Motif Atlas
- Homologous match to HL_5J7L_015
- Geometric discrepancy: 0.4326
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
1FKA|1|A|C|673
1FKA|1|A|G|674
1FKA|1|A|G|675
1FKA|1|A|U|676
1FKA|1|A|G|677
1FKA|1|A|A|678
1FKA|1|A|A|679
1FKA|1|A|A|680
1FKA|1|A|U|681
1FKA|1|A|G|682
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain K
- 30S RIBOSOMAL PROTEIN S11
Coloring options: