HL_1GAX_004
3D structure
- PDB id
- 1GAX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGCGGAAG
- Length
- 9 nucleotides
- Bulged bases
- 1GAX|1|D|C|916, 1GAX|1|D|G|917, 1GAX|1|D|G|918, 1GAX|1|D|A|919
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_07951.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
1GAX|1|D|C|913
1GAX|1|D|A|914
1GAX|1|D|G|915
1GAX|1|D|C|916
1GAX|1|D|G|917
1GAX|1|D|G|918
1GAX|1|D|A|919
1GAX|1|D|A|920
1GAX|1|D|G|921
Current chains
- Chain D
- TRNA(VAL)
Nearby chains
- Chain B
- VALYL-TRNA SYNTHETASE
Coloring options: