HL_1GAX_005

3D structure

PDB id

1GAX (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUCACACG

Length

9 nucleotides

Bulged bases

1GAX|1|D|C|931, 1GAX|1|D|U|932, 1GAX|1|D|C|933, 1GAX|1|D|C|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80362.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

1GAX|1|D|C|930
1GAX|1|D|C|931
1GAX|1|D|U|932
1GAX|1|D|C|933
1GAX|1|D|A|934
1GAX|1|D|C|935
1GAX|1|D|A|936
1GAX|1|D|C|937
1GAX|1|D|G|938

Current chains

Chain D

TRNA(VAL)

Nearby chains

Chain B

VALYL-TRNA SYNTHETASE