HL_1HC8_001

3D structure

PDB id

1HC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

1HC8|1|C|A|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92304.2

Basepair signature

cWW-cSW-R-R-tSH-R-R

Number of instances in this motif group

5

Unit IDs

1HC8|1|C|C|114
1HC8|1|C|U|115
1HC8|1|C|U|116
1HC8|1|C|A|117
1HC8|1|C|G|118
1HC8|1|C|A|119
1HC8|1|C|A|120
1HC8|1|C|G|121
1HC8|1|C|C|122
1HC8|1|C|A|123
1HC8|1|C|G|124

Current chains

Chain C

58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN

Nearby chains

Chain A

RIBOSOMAL PROTEIN L11

Chain B

RIBOSOMAL PROTEIN L11

Chain D

Large subunit ribosomal RNA; LSU rRNA