HL_1HC8_003

3D structure

PDB id

1HC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

1HC8|1|D|A|320

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1HC8_003 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.097

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20174.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

1HC8|1|D|C|314
1HC8|1|D|U|315
1HC8|1|D|U|316
1HC8|1|D|A|317
1HC8|1|D|G|318
1HC8|1|D|A|319
1HC8|1|D|A|320
1HC8|1|D|G|321
1HC8|1|D|C|322
1HC8|1|D|A|323
1HC8|1|D|G|324

Current chains

Chain D

58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN

Nearby chains

Chain B

RIBOSOMAL PROTEIN L11