HL_1HMH_003

3D structure

PDB id

1HMH (explore in PDB, NAKB, or RNA 3D Hub)

Description

THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

1HMH|1|E|C|104
1HMH|1|E|G|21|||L
1HMH|1|E|A|22|||L
1HMH|1|E|A|23|||L
1HMH|1|E|A|24|||L
1HMH|1|E|G|114

Current chains

Chain E

HAMMERHEAD RIBOZYME-RNA STRAND

Nearby chains

Chain A

HAMMERHEAD RIBOZYME-RNA STRAND

Chain C

HAMMERHEAD RIBOZYME-RNA STRAND

Chain F

HAMMERHEAD RIBOZYME-DNA STRAND