3D structure

PDB id
1HR0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1HR0_020 not in the Motif Atlas
Homologous match to HL_5J7L_020
Geometric discrepancy: 0.0692
The information below is about HL_5J7L_020
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

1HR0|1|A|C|897
1HR0|1|A|G|898
1HR0|1|A|C|899
1HR0|1|A|A|900
1HR0|1|A|A|901
1HR0|1|A|G|902

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain Q
30S RIBOSOMAL PROTEIN S17

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1435 s