HL_1I94_032

3D structure

PDB id

1I94 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I94_032 not in the Motif Atlas

Geometric match to HL_3NVI_002

Geometric discrepancy: 0.1285

The information below is about HL_3NVI_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

1I94|1|A|C|1492
1I94|1|A|G|1493
1I94|1|A|G|1494
1I94|1|A|A|1495
1I94|1|A|A|1496
1I94|1|A|G|1497

Current chains

Chain A

16S RRNA

Nearby chains