HL_1I95_025

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

1I95|1|A|G|1076

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I95_025 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1216

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

18

Unit IDs

1I95|1|A|G|1071
1I95|1|A|U|1072
1I95|1|A|U|1073
1I95|1|A|A|1074
1I95|1|A|A|1075
1I95|1|A|G|1076
1I95|1|A|U|1077
1I95|1|A|C|1078

Current chains

Chain A

16S RRNA

Nearby chains

Chain B

30S RIBOSOMAL PROTEIN S2

Chain G

30S RIBOSOMAL PROTEIN S7