HL_1I95_037

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CCGCGAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I95_037 not in the Motif Atlas

Geometric match to HL_8KAL_001

Geometric discrepancy: 0.2623

The information below is about HL_8KAL_001

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_45359.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

1I95|1|A|C|1007
1I95|1|A|C|1008
1I95|1|A|G|1009
1I95|1|A|C|1010
1I95|1|A|G|1011
1I95|1|A|A|1012
1I95|1|A|G|1013
1I95|1|A|G|1014

Current chains

Chain A

16S RRNA

Nearby chains