HL_1I97_009

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

1I97|1|A|A|339

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I97_009 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.3511

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

1I97|1|A|C|336
1I97|1|A|C|337
1I97|1|A|U|338
1I97|1|A|A|339
1I97|1|A|C|340
1I97|1|A|G|341
1I97|1|A|G|342
1I97|1|A|G|343

Current chains

Chain A

16S RRNA

Nearby chains