HL_1I97_040

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CGCGAAAGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1I97_040 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.246

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

1I97|1|A|C|1145
1I97|1|A|G|1146
1I97|1|A|C|1147
1I97|1|A|G|1148
1I97|1|A|A|1149
1I97|1|A|A|1150
1I97|1|A|A|1151
1I97|1|A|G|1152
1I97|1|A|C|1153
1I97|1|A|G|1154

Current chains

Chain A

16S RRNA

Nearby chains

Chain G

30S RIBOSOMAL PROTEIN S7