HL_1IBK_001
3D structure
- PDB id
- 1IBK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.31 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- 1IBK|1|A|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1IBK_001 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.0506
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.1
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
1IBK|1|A|U|12
1IBK|1|A|U|13
1IBK|1|A|U|14
1IBK|1|A|G|15
1IBK|1|A|A|16
1IBK|1|A|U|17
1IBK|1|A|C|18
1IBK|1|A|C|19
1IBK|1|A|U|20
1IBK|1|A|G|21
1IBK|1|A|G|22
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain L
- 30S RIBOSOMAL PROTEIN S12
Coloring options: