Motif HL_73535.1 Version HL_73535.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8B0X_001 | 8B0X | 0.1520 | 0 | A | SSU rRNA | U | 12 | U | 13 | U | 14 | G | 15 | A | 16 | U | 17 | C | 18 | A | 19 | U | 20 | G | 21 | G | 22 | cWW | tHW |
| 2 | HL_4LFB_001 | 4LFB | 0.1445 | 0 | A | SSU rRNA | U | 12 | U | 13 | U | 14 | G | 15 | A | 16 | U | 17 | C | 18 | C | 19 | U | 20 | G | 21 | G | 22 | cWW | tHW |
| 3 | HL_8GLP_085 | 8GLP | 0.0541 | 0 | S2 | SSU rRNA | G | 7 | U | 8 | U | 9 | G | 10 | A | 11 | U | 12 | C | 13 | C | 14 | U | 15 | G | 16 | C | 17 | cWW | tHW |
| 4 | HL_8CRE_191 | 8CRE | 0.0000 | 0 | CM | SSU rRNA | G | 7 | U | 8 | U | 9 | G | 10 | A | 11 | U | 12 | C | 13 | C | 14 | U | 15 | G | 16 | C | 17 | cWW | tHW |
| 5 | HL_8P9A_190 | 8P9A | 0.0669 | 0 | sR | SSU rRNA | G | 7 | U | 8 | U | 9 | G | 10 | A | 11 | U | 12 | C | 13 | C | 14 | U | 15 | G | 16 | C | 17 | cWW | tHW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGAUCCUGC | 3 |
| UUUGAUCAUGG | 1 |
| UUUGAUCCUGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGAUCCUG | 4 |
| UUGAUCAUG | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.05 | Avg 0.09 | Max 0.16
Coloring options: