HL_1IL2_005

3D structure

PDB id

1IL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate Complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

C(PSU)UGUC(1MG)CG

Length

9 nucleotides

Bulged bases

1IL2|1|D|U|1933

QA status

Modified nucleotides: PSU, 1MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1IL2_005 not in the Motif Atlas

Homologous match to HL_1IL2_002

Geometric discrepancy: 0.0959

The information below is about HL_1IL2_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50537.6

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

1IL2|1|D|C|1931
1IL2|1|D|PSU|1932
1IL2|1|D|U|1933
1IL2|1|D|G|1934
1IL2|1|D|U|1935
1IL2|1|D|C|1936
1IL2|1|D|1MG|1937
1IL2|1|D|C|1938
1IL2|1|D|G|1939

Current chains

Chain D

ASPARTYL TRANSFER RNA

Nearby chains

Chain B

ASPARTYL-TRNA SYNTHETASE