HL_1J5A_048

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGGUAAGUUCC

Length

11 nucleotides

Bulged bases

1J5A|1|A|A|1935, 1J5A|1|A|U|1938

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|G|1931
1J5A|1|A|G|1932
1J5A|1|A|G|1933
1J5A|1|A|U|1934
1J5A|1|A|A|1935
1J5A|1|A|A|1936
1J5A|1|A|G|1937
1J5A|1|A|U|1938
1J5A|1|A|U|1939
1J5A|1|A|C|1940
1J5A|1|A|C|1941

Current chains

Chain A

23S RRNA

Nearby chains