RNA 3D Hub //

1J5A Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_1J5A_0011/A/58:67Pseudoknot with intercalation
homologous
HL_7A0S_001
HL_93438.2
HL_1J5A_0021/A/85:95No text annotation
homologous
HL_7A0S_002
HL_50418.1
HL_1J5A_0031/A/121:126No text annotation
homologous
HL_7RQB_003
NA
HL_1J5A_0041/A/133:138No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1J5A_0051/A/146:151No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_1J5A_0061/A/172:177No text annotation
geometric
HL_2Y8W_001
HL_81100.2
HL_1J5A_0071/A/202:207No text annotation
homologous
HL_7A0S_007
HL_53890.2
HL_1J5A_0081/A/223:229No text annotation
homologous
HL_4WF9_008
HL_37369.2
HL_1J5A_0091/A/316:323T-loop with 1 bulged base
homologous
HL_7A0S_010
HL_01609.3
HL_1J5A_0101/A/330:334No text annotation
geometric
HL_8C3A_054
NA
HL_1J5A_0111/A/338:346T-loop with unstacked turn
homologous
HL_5J7L_144
HL_27670.2
HL_1J5A_0121/A/396:404No text annotation
HL_1J5A_0131/A/423:430Pseudoknot geometry
homologous
HL_7A0S_014
HL_30680.3
HL_1J5A_0141/A/473:478GNRA
homologous
HL_4WF9_015
HL_37824.8
HL_1J5A_0151/A/498:503GNRA
homologous
HL_7A0S_016
HL_37824.8
HL_1J5A_0161/A/552:560No text annotation
HL_1J5A_0801/A/575:584T-loop with 2 stacked bulged bases
homologous
HL_7A0S_018
HL_28252.9
HL_1J5A_0181/A/615:633No text annotation
HL_1J5A_0191/A/640:645GNRA
homologous
HL_5J7L_152
HL_37824.8
HL_1J5A_0201/A/651:658No text annotation
homologous
HL_7A0S_021
HL_28075.1
HL_1J5A_0211/A/725:732No text annotation
HL_1J5A_0221/A/757:766No text annotation
homologous
HL_4WF9_023
HL_88205.2
HL_1J5A_0701/A/792:798No text annotation
geometric
HL_361D_002
HL_13963.3
HL_1J5A_0241/A/839:844No text annotation
homologous
HL_7RQB_025
NA
HL_1J5A_0261/A/966:973GNRA
homologous
HL_7A0S_026
HL_37824.8
HL_1J5A_0271/A/989:996No text annotation
homologous
HL_7A0S_027
HL_42998.2
HL_1J5A_0281/A/1075:1085No text annotation
homologous
HL_6PRV_001
HL_19210.3
HL_1J5A_0291/A/1103:1110No text annotation
homologous
HL_7RQB_030
NA
HL_1J5A_0811/A/1185:1189No text annotation
HL_1J5A_0311/A/1235:1240GNRA
homologous
HL_7A0S_031
HL_37824.8
HL_1J5A_0321/A/1294:1302T-loop with 2 stacked bulged bases
homologous
HL_7A0S_032
HL_28252.9
HL_1J5A_0331/A/1337:1343Pseudoknot geometry with 3' bulge
homologous
HL_4WF9_033
HL_57176.2
HL_1J5A_0341/A/1376:1381GNRA
homologous
HL_7RQB_035
NA
HL_1J5A_0351/A/1402:1411No text annotation
homologous
HL_7A0S_035
HL_81545.2
HL_1J5A_0361/A/1463:1478No text annotation
HL_1J5A_0371/A/1503:1517No text annotation
geometric
HL_7KI3_001
HL_75660.5
HL_1J5A_0381/A/1549:1553No text annotation
geometric
HL_4V9F_003
HL_75660.5
HL_1J5A_0391/A/1581:1584No text annotation
homologous
HL_7RQB_039
NA
HL_1J5A_0401/A/1628:1635No text annotation
homologous
HL_4WF9_038
HL_89567.2
HL_1J5A_0411/A/1647:1652No text annotation
homologous
HL_7RQB_041
NA
HL_1J5A_0421/A/1708:1713UNCG
homologous
HL_4WF9_040
HL_34617.5
HL_1J5A_0821/A/1731:1735No text annotation
HL_1J5A_0441/A/1743:1747No text annotation
homologous
HL_7A0S_044
HL_80709.3
HL_1J5A_0451/A/1767:1779No text annotation
homologous
HL_7A0S_045
HL_60266.1
HL_1J5A_0461/A/1797:1803GNRA related
homologous
HL_5J7L_179
HL_04783.2
HL_1J5A_0721/A/1843:1874No text annotation
HL_1J5A_0471/A/1854:1862No text annotation
homologous
HL_4WF9_045
NA
HL_1J5A_0831/A/1932:1940No text annotation
homologous
HL_7A0S_048
HL_20167.2
HL_1J5A_0491/A/2010:2019No text annotation
homologous
HL_7RQB_050
NA
HL_1J5A_0511/A/2186:2199No text annotation
HL_1J5A_0521/A/2227:2235No text annotation
homologous
HL_7A0S_052
HL_85367.2
HL_1J5A_0531/A/2243:2255No text annotation
homologous
HL_5J7L_187
HL_91939.2
HL_1J5A_0541/A/2282:2292No text annotation
HL_1J5A_0551/A/2303:2310Pseudoknot geometry
homologous
HL_7A0S_055
HL_93324.4
HL_1J5A_0751/A/2329:2346No text annotation
HL_1J5A_0561/A/2332:2343No text annotation
HL_1J5A_0571/A/2353:2358GNRA
homologous
HL_7A0S_057
HL_37824.8
HL_1J5A_0581/A/2383:2392No text annotation
homologous
HL_7A0S_058
HL_53454.2
HL_1J5A_0771/A/2445:2463No text annotation
HL_1J5A_0591/A/2450:2458No text annotation
homologous
HL_4WF9_056
HL_32735.2
HL_1J5A_0601/A/2507:2514No text annotation
homologous
HL_7RQB_061
NA
HL_1J5A_0611/A/2530:2536No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_1J5A_0621/A/2573:2578GNRA
homologous
HL_7A0S_062
HL_37824.8
HL_1J5A_0791/A/2631:2647No text annotation
HL_1J5A_0631/A/2637:2642GNRA
homologous
HL_7A0S_063
HL_37824.8
HL_1J5A_0641/A/2680:2685Ribsomal LSU H95
homologous
HL_5J7L_198
HL_65794.5
HL_1J5A_0651/A/2725:2739No text annotation
homologous
HL_4WF9_062
HL_74055.2
HL_1J5A_0671/A/2794:2802No text annotation
homologous
HL_4WF9_064
HL_64690.6
HL_1J5A_0681/A/2831:2836GNRA
homologous
HL_7A0S_068
HL_37824.8

Problematic loops

#loop idProblemSequence
HL_1J5A_069No text annotation
HL_1J5A_017No text annotation
HL_1J5A_023No text annotation
HL_1J5A_025No text annotation
HL_1J5A_030No text annotation
HL_1J5A_071No text annotation
HL_1J5A_043No text annotation
HL_1J5A_048No text annotation
HL_1J5A_050No text annotation
HL_1J5A_073No text annotation
HL_1J5A_074No text annotation
HL_1J5A_076No text annotation
HL_1J5A_078No text annotation
HL_1J5A_066No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_1J5A_0011/A/24:30,
1/A/520:526		Triple sheared with non-canonical cWW
geometric
IL_7RQB_001
NA
IL_1J5A_0021/A/36:37,
1/A/454:456		Single bulged A
homologous
IL_7A0S_002
IL_31462.7
IL_1J5A_0041/A/42:43,
1/A/447:449		Minor groove platform
homologous
IL_7RQB_003
NA
IL_1J5A_0051/A/80:84,
1/A/96:103		Kink-turn
homologous
IL_7A0S_004
IL_94910.1
IL_1J5A_0061/A/160:161,
1/A/189:191		Single stack bend
homologous
IL_4WF9_007
IL_90729.1
IL_1J5A_0071/A/165:171,
1/A/178:185		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_250
IL_04346.10
IL_1J5A_0081/A/215:222,
1/A/230:236		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7A0S_007
IL_04346.10
IL_1J5A_0091/A/291:295,
1/A/367:370		No text annotation
geometric
IL_1HYS_004
IL_64231.5
IL_1J5A_0101/A/299:303,
1/A/359:363		No text annotation
geometric
IL_1U6B_004
IL_64231.5
IL_1J5A_0111/A/303:306,
1/A/354:359		No text annotation
homologous
IL_7A0S_008
IL_15067.1
IL_1J5A_0131/A/492:495,
1/A/506:519		No text annotation
geometric
IL_7A0S_009
IL_81516.2
IL_1J5A_1211/A/573:575,
1/A/584:586		Isolated non-canonical cWW pair
homologous
IL_7A0S_011
IL_07785.1
IL_1J5A_0151/A/600:602,
1/A/678:679		Single bulged A
homologous
IL_7A0S_012
IL_31462.7
IL_1J5A_0161/A/685:687,
1/A/819:821		Isolated non-canonical cWW pair
geometric
IL_4LFB_010
IL_87907.2
IL_1J5A_0171/A/687:691,
1/A/812:819		tHW-tHW cross-strand stack
homologous
IL_7A0S_015
IL_54041.2
IL_1J5A_0191/A/715:716,
1/A/741:743		Single bulged G
geometric
IL_4V9F_026
IL_00225.14
IL_1J5A_1131/A/715:721,
1/A/736:743		Triple sheared with non-canonical cWW
geometric
IL_8VTW_001
NA
IL_1J5A_0201/A/716:721,
1/A/736:741		Triple sheared with non-canonical cWW
homologous
IL_7A0S_018
IL_06136.2
IL_1J5A_0211/A/751:754,
1/A/769:771		Major groove platform with extra cWW
homologous
IL_7A0S_019
IL_51387.3
IL_1J5A_0221/A/754:756,
1/A/767:769		Isolated non-canonical cWW pair
homologous
IL_7A0S_020
IL_87907.2
IL_1J5A_0231/A/850:851,
1/A/951:953		Single stack bend
homologous
IL_7A0S_022
IL_90729.1
IL_1J5A_0241/A/857:864,
1/A/938:945		No text annotation
IL_1J5A_0251/A/864:866,
1/A/936:938		No text annotation
geometric
IL_3LA5_001
NA
IL_1J5A_0261/A/871:875,
1/A/927:931		No text annotation
IL_1J5A_0271/A/875:876,
1/A/925:927		Minor groove platform
geometric
IL_5J7L_247
IL_51454.3
IL_1J5A_0281/A/877:881,
1/A/921:924		C-loop
homologous
IL_7A0S_029
IL_26222.2
IL_1J5A_0291/A/883:885,
1/A/917:919		Isolated near basepair
homologous
IL_7A0S_030
IL_42997.3
IL_1J5A_0301/A/963:965,
1/A/974:976		Isolated non-canonical cWW pair
homologous
IL_7A0S_031
IL_87907.2
IL_1J5A_0311/A/1003:1005,
1/A/1171:1174		Isolated non-canonical cWW contact
geometric
IL_5UNE_001
IL_44465.1
IL_1J5A_0321/A/1005:1007,
1/A/1170:1171		Single bulged C
geometric
IL_1DQF_001
IL_61258.15
IL_1J5A_0331/A/1009:1013,
1/A/1164:1168		UAA/GAN
homologous
IL_7A0S_033
IL_38507.2
IL_1J5A_0341/A/1015:1022,
1/A/1161:1162		SSU/LSU pseudoknot
geometric
IL_5J7L_278
IL_41203.4
IL_1J5A_0351/A/1022:1024,
1/A/1160:1161		Single bulged U
homologous
IL_5J7L_279
IL_89505.4
IL_1J5A_0361/A/1027:1035,
1/A/1150:1157		No text annotation
IL_1J5A_1121/A/1035:1041,
1/A/1135:1150		No text annotation
geometric
IL_7A0S_037
IL_50715.3
IL_1J5A_0371/A/1042:1045,
1/A/1132:1134		Isolated non-canonical cWW pair
homologous
IL_4WF9_041
IL_57744.1
IL_1J5A_1141/A/1051:1065,
1/A/1116:1126		No text annotation
IL_1J5A_0411/A/1054:1062,
1/A/1120:1123		No text annotation
IL_1J5A_0421/A/1062:1063,
1/A/1118:1120		Single stack bend
geometric
IL_7RQB_058
NA
IL_1J5A_0441/A/1070:1073,
1/A/1087:1090		No text annotation
IL_1J5A_0461/A/1210:1212,
1/A/1260:1263		Isolated cWS basepair
homologous
IL_4WF9_044
IL_42997.3
IL_1J5A_0471/A/1218:1220,
1/A/1252:1254		Isolated non-canonical cWW pair
homologous
IL_7A0S_042
IL_87907.2
IL_1J5A_0481/A/1221:1228,
1/A/1247:1251		Kink-turn
homologous
IL_7A0S_043
IL_70923.9
IL_1J5A_0491/A/1232:1234,
1/A/1241:1243		Intercalated cWW
homologous
IL_7A0S_044
IL_31737.3
IL_1J5A_0501/A/1332:1336,
1/A/1344:1346		C-loop
homologous
IL_7A0S_047
IL_83150.2
IL_1J5A_0511/A/1364:1368,
1/A/1389:1393		UAA/GAN
homologous
IL_5J7L_292
IL_89021.2
IL_1J5A_0521/A/1370:1374,
1/A/1383:1387		tSH-tHW-tHS
homologous
IL_7A0S_049
IL_17136.7
IL_1J5A_0541/A/1426:1430,
1/A/1598:1605		No text annotation
IL_1J5A_0551/A/1430:1438,
1/A/1590:1598		No text annotation
IL_1J5A_1161/A/1447:1449,
1/A/1573:1576		No text annotation
homologous
IL_7A0S_052
IL_14688.1
IL_1J5A_0571/A/1451:1454,
1/A/1567:1571		tSH-tHW
homologous
IL_5J7L_297
IL_99646.2
IL_1J5A_0581/A/1483:1490,
1/A/1533:1539		No text annotation
IL_1J5A_0601/A/1546:1547,
1/A/1555:1557		Single stack bend
geometric
IL_7RQB_058
NA
IL_1J5A_0621/A/1668:1673,
1/A/1987:1989		No text annotation
homologous
IL_5J7L_304
IL_12566.4
IL_1J5A_0641/A/1680:1682,
1/A/1978:1980		Isolated tWW turn
homologous
IL_4WF9_063
IL_67095.2
IL_1J5A_1171/A/1680:1686,
1/A/1976:1980		No text annotation
IL_1J5A_0651/A/1683:1686,
1/A/1976:1977		Major groove platform; stack outside cWW
geometric
IL_4V9F_008
IL_50694.7
IL_1J5A_0661/A/1686:1691,
1/A/1973:1976		Intercalated tWH
homologous
IL_7A0S_062
IL_76758.2
IL_1J5A_0671/A/1703:1708,
1/A/1713:1719		tSH-tSH-tHH-tHS
geometric
IL_7RQB_068
NA
IL_1J5A_0701/A/1761:1762,
1/A/1963:1965		Single bulged A
homologous
IL_4WF9_068
IL_31462.7
IL_1J5A_0711/A/1789:1795,
1/A/1805:1813		Kink-turn related
homologous
IL_7A0S_065
IL_17069.5
IL_1J5A_0721/A/1829:1832,
1/A/1885:1886		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
IL_95583.2
IL_1J5A_1191/A/1833:1834,
1/A/1881:1884		Major groove intercalation
homologous
IL_4WF9_071
IL_82107.5
IL_1J5A_0741/A/1838:1842,
1/A/1875:1877		No text annotation
geometric
IL_8C3A_508
NA
IL_1J5A_0751/A/1916:1930,
1/A/1942:1950		No text annotation
IL_1J5A_0761/A/2033:2035,
1/A/2596:2597		Major groove platform
homologous
IL_7RQB_078
NA
IL_1J5A_0771/A/2037:2040,
1/A/2590:2594		No text annotation
homologous
IL_7RQB_079
NA
IL_1J5A_0781/A/2050:2052,
1/A/2421:2422		Single bulged U
homologous
IL_7A0S_075
IL_89505.4
IL_1J5A_0791/A/2053:2054,
1/A/2417:2420		Minor groove platform
homologous
IL_4WF9_081
IL_51454.3
IL_1J5A_0801/A/2064:2066,
1/A/2215:2218		Isolated tHS basepair with bulges
homologous
IL_4WF9_082
IL_85599.2
IL_1J5A_0811/A/2068:2070,
1/A/2211:2213		Isolated non-canonical cWW pair
homologous
IL_7A0S_078
IL_28037.2
IL_1J5A_0841/A/2276:2278,
1/A/2296:2300		Isolated tHS basepair with bulges
geometric
IL_4V9F_076
IL_85599.2
IL_1J5A_0861/A/2329:2332,
1/A/2343:2346		Double sheared
homologous
IL_7A0S_081
IL_09705.15
IL_1J5A_0881/A/2380:2382,
1/A/2393:2394		Major groove platform
homologous
IL_7RQB_090
NA
IL_1J5A_0891/A/2432:2433,
1/A/2477:2479		Single stack bend
geometric
IL_7KGA_006
IL_26793.1
IL_1J5A_0901/A/2433:2434,
1/A/2475:2477		Major groove platform
homologous
IL_4WF9_090
IL_48076.6
IL_1J5A_0911/A/2436:2438,
1/A/2472:2473		Major groove platform
geometric
IL_7A0S_085
IL_48076.6
IL_1J5A_0921/A/2438:2440,
1/A/2468:2472		Major groove minor groove platform with extra cWW
homologous
IL_7RQB_094
NA
IL_1J5A_0931/A/2445:2450,
1/A/2458:2463		No text annotation
geometric
IL_5J7L_057
IL_85536.2
IL_1J5A_0941/A/2486:2487,
1/A/2559:2561		Major groove platform
homologous
IL_4WF9_094
IL_07039.3
IL_1J5A_0951/A/2489:2491,
1/A/2553:2557		Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA
IL_1J5A_0961/A/2491:2492,
1/A/2550:2553		Multiple bulged bases
homologous
IL_7RQB_098
NA
IL_1J5A_0971/A/2501:2502,
1/A/2519:2522		Major groove platform with intercalation
homologous
IL_7RQB_099
NA
IL_1J5A_0991/A/2570:2571,
1/A/2580:2582		Single bulged A
homologous
IL_7RQB_101
NA
IL_1J5A_1011/A/2615:2619,
1/A/2754:2762		tSH-tHS-tHW
homologous
IL_7RQB_102
NA
IL_1J5A_1021/A/2631:2637,
1/A/2642:2647		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_7A0S_094
IL_16458.4
IL_1J5A_1031/A/2659:2664,
1/A/2704:2707		C-loop with extra cWW pair
geometric
IL_4V88_408
NA
IL_1J5A_1221/A/2666:2670,
1/A/2698:2702		UAA/GAN related, with intercalation
homologous
IL_7A0S_096
IL_23774.1
IL_1J5A_1051/A/2674:2675,
1/A/2690:2694		Multiple bulged bases
homologous
IL_7RQB_106
NA
IL_1J5A_1061/A/2717:2722,
1/A/2742:2747		UAA/GAN with extra cWW
geometric
IL_5J7L_350
IL_49767.8
IL_1J5A_1091/A/2813:2814,
1/A/2853:2855		Major groove intercalation
homologous
IL_5J7L_352
IL_66635.5
IL_1J5A_1101/A/2818:2820,
1/A/2846:2849		Decoding loop related
homologous
IL_7A0S_100
IL_31531.3
IL_1J5A_1111/A/2822:2827,
1/A/2840:2844		No text annotation
homologous
IL_7A0S_101
IL_70411.2

Problematic loops

#loop idProblemSequence
IL_1J5A_003No text annotation
IL_1J5A_012Isolated cWH basepair
IL_1J5A_014Isolated non-canonical cWW pair
IL_1J5A_018No text annotation
IL_1J5A_038Isolated non-canonical cWW pair
IL_1J5A_039Isolated non-canonical cWW pair
IL_1J5A_040No text annotation
IL_1J5A_043No text annotation
IL_1J5A_045No text annotation
IL_1J5A_115Kink-turn
IL_1J5A_053No text annotation
IL_1J5A_056No text annotation
IL_1J5A_059No text annotation
IL_1J5A_061Isolated non-canonical cWW pair
IL_1J5A_063Isolated non-canonical cWW pair
IL_1J5A_068Isolated non-canonical cWW pair
IL_1J5A_069Isolated non-canonical cWW pair
IL_1J5A_118Isolated non-canonical cWW pair
IL_1J5A_073Isolated non-canonical cWW with bulges
IL_1J5A_082Isolated non-canonical cWW pair
IL_1J5A_083Isolated non-canonical cWW pair
IL_1J5A_085Tandem non-canonical cWW pairs
IL_1J5A_087Isolated non-canonical cWW pair
IL_1J5A_120No text annotation
IL_1J5A_098Isolated cWS basepair
IL_1J5A_100Isolated non-canonical cWW pair
IL_1J5A_104No text annotation
IL_1J5A_107Isolated cWH basepair
IL_1J5A_108Isolated non-canonical cWW pair

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_1J5A_0091/A/30:31,
1/A/485:492,
1/A/519:520		No text annotation
geometric
J3_7A0S_001
J3_60031.2
J3_1J5A_0121/A/30:31,
1/A/485:495,
1/A/506:520		No text annotation
homologous
J3_7A0S_015
J3_92134.2
J3_1J5A_0131/A/32:35,
1/A/457:472,
1/A/479:484		No text annotation
homologous
J3_7A0S_016
J3_30040.2
J3_1J5A_0101/A/55:56,
1/A/69:75,
1/A/108:112		No text annotation
homologous
J3_5J7L_037
J3_35667.2
J3_1J5A_0151/A/308:312,
1/A/327:336,
1/A/348:352		No text annotation
homologous
J3_5J7L_068
J3_46299.2
J3_1J5A_0161/A/611:615,
1/A/633:639,
1/A/646:669		No text annotation
J3_1J5A_0011/A/696:700,
1/A/788:790,
1/A/800:807		No text annotation
J3_1J5A_0171/A/696:702,
1/A/786:790,
1/A/800:807		No text annotation
J3_1J5A_0021/A/710:713,
1/A/745:749,
1/A/773:778		No text annotation
geometric
J3_5TBW_005
NA
J3_1J5A_0031/A/1066:1068,
1/A/1092:1102,
1/A/1111:1115		No text annotation
J3_1J5A_0041/A/1311:1316,
1/A/1641:1643,
1/A/1656:1659		No text annotation
homologous
J3_7A0S_006
J3_32852.6
J3_1J5A_0051/A/1319:1322,
1/A/1621:1627,
1/A/1636:1638		No text annotation
homologous
J3_7A0S_007
J3_71677.1
J3_1J5A_0231/A/1357:1363,
1/A/1394:1398,
1/A/1415:1416		No text annotation
homologous
J3_7A0S_018
J3_31965.2
J3_1J5A_0201/A/1426:1443,
1/A/1580:1581,
1/A/1584:1605		No text annotation
J3_1J5A_0061/A/1825:1827,
1/A/1888:1916,
1/A/1950:1955		No text annotation
J3_1J5A_0071/A/2274:2276,
1/A/2300:2302,
1/A/2311:2316		No text annotation
homologous
J3_7A0S_010
J3_61124.2
J3_1J5A_0211/A/2274:2278,
1/A/2296:2302,
1/A/2311:2316		No text annotation
homologous
J3_5J7L_071
J3_44961.1
J3_1J5A_0241/A/2496:2499,
1/A/2524:2526,
1/A/2540:2546		No text annotation
homologous
J3_7A0S_011
J3_32601.5
J3_1J5A_0111/A/2789:2790,
1/A/2806:2811,
1/A/2857:2861		No text annotation
homologous
J3_7A0S_013
J3_76911.2
J4_1J5A_0011/A/1283:1289,
1/A/1307:1308,
1/A/1662:1665,
1/A/1992:1993		No text annotation
homologous
J4_7A0S_004
J4_64571.5
J4_1J5A_0021/A/1323:1327,
1/A/1351:1356,
1/A/1417:1418,
1/A/1613:1620		No text annotation
homologous
J4_7A0S_005
J4_69051.6
J4_1J5A_0071/A/1458:1460,
1/A/1481:1498,
1/A/1522:1545,
1/A/1558:1563		No text annotation
J4_1J5A_0041/A/1763:1767,
1/A/1779:1783,
1/A/1819:1822,
1/A/1958:1962		No text annotation
homologous
J4_5J7L_025
J4_61477.5
J4_1J5A_0081/A/2264:2268,
1/A/2322:2326,
1/A/2349:2351,
1/A/2360:2362		No text annotation
homologous
J4_7A0S_009
J4_04930.6
J4_1J5A_0061/A/2622:2625,
1/A/2653:2655,
1/A/2711:2716,
1/A/2748:2751		No text annotation
homologous
J4_7A0S_010
J4_54165.1
J5_1J5A_0061/A/46:53,
1/A/114:119,
1/A/128:129,
1/A/142:143,
1/A/154:155		No text annotation
homologous
J5_7A0S_001
J5_68783.1
J5_1J5A_0021/A/593:598,
1/A/681:684,
1/A/822:825,
1/A/1209:1210,
1/A/1263:1269		No text annotation
homologous
J5_7A0S_004
J5_74302.5
J5_1J5A_0031/A/1680:1700,
1/A/1722:1724,
1/A/1742:1743,
1/A/1747:1755,
1/A/1971:1980		No text annotation
J5_1J5A_0041/A/1686:1700,
1/A/1722:1724,
1/A/1742:1743,
1/A/1747:1755,
1/A/1971:1976		No text annotation
J5_1J5A_0051/A/2037:2047,
1/A/2425:2432,
1/A/2479:2486,
1/A/2561:2567,
1/A/2585:2594		No text annotation
J6_1J5A_0011/A/44:45,
1/A/156:160,
1/A/191:201,
1/A/208:212,
1/A/239:243,
1/A/439:446		No text annotation
J6_1J5A_0031/A/2057:2060,
1/A/2222:2226,
1/A/2236:2238,
1/A/2260:2263,
1/A/2363:2374,
1/A/2400:2414		No text annotation
J7_1J5A_0021/A/830:835,
1/A/848:851,
1/A/951:957,
1/A/982:987,
1/A/998:1005,
1/A/1171:1178,
1/A/1196:1204		No text annotation

Problematic loops

#loop idProblemSequence
J3_1J5A_014No text annotation
J3_1J5A_018No text annotation
J3_1J5A_019No text annotation
J3_1J5A_022No text annotation
J3_1J5A_008No text annotation
J4_1J5A_003No text annotation
J4_1J5A_005No text annotation
J5_1J5A_001No text annotation
J6_1J5A_002No text annotation
J7_1J5A_001No text annotation

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