HL_1J5A_054

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

1J5A|1|A|U|2285, 1J5A|1|A|G|2287, 1J5A|1|A|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|G|2282
1J5A|1|A|G|2283
1J5A|1|A|U|2284
1J5A|1|A|U|2285
1J5A|1|A|G|2286
1J5A|1|A|G|2287
1J5A|1|A|A|2288
1J5A|1|A|A|2289
1J5A|1|A|A|2290
1J5A|1|A|U|2291
1J5A|1|A|C|2292

Current chains

Chain A

23S RRNA

Nearby chains