HL_1J5A_072

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UCAAGUGGAGCGGUGCAAGCUGCGAAAUGAAG

Length

32 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|U|1843
1J5A|1|A|C|1844
1J5A|1|A|A|1845
1J5A|1|A|A|1846
1J5A|1|A|G|1847
1J5A|1|A|U|1848
1J5A|1|A|G|1849
1J5A|1|A|G|1850
1J5A|1|A|A|1851
1J5A|1|A|G|1852
1J5A|1|A|C|1853
1J5A|1|A|G|1854
1J5A|1|A|G|1855
1J5A|1|A|U|1856
1J5A|1|A|G|1857
1J5A|1|A|C|1858
1J5A|1|A|A|1859
1J5A|1|A|A|1860
1J5A|1|A|G|1861
1J5A|1|A|C|1862
1J5A|1|A|U|1863
1J5A|1|A|G|1864
1J5A|1|A|C|1865
1J5A|1|A|G|1866
1J5A|1|A|A|1867
1J5A|1|A|A|1868
1J5A|1|A|A|1869
1J5A|1|A|U|1870
1J5A|1|A|G|1871
1J5A|1|A|A|1872
1J5A|1|A|A|1873
1J5A|1|A|G|1874

Current chains

Chain A

23S RRNA

Nearby chains