HL_1JZX_023

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

1JZX|1|A|A|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1JZX_023 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2379

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46211.1

Basepair signature

cWW-cWW-tSW-F

Number of instances in this motif group

10

Unit IDs

1JZX|1|A|G|791
1JZX|1|A|U|792
1JZX|1|A|G|793
1JZX|1|A|A|794
1JZX|1|A|A|795
1JZX|1|A|A|796
1JZX|1|A|A|797
1JZX|1|A|G|798
1JZX|1|A|C|799

Current chains

Chain A

23S rRNA

Nearby chains