3D structure

PDB id
1K73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
CUGAACGCAUCUAAG
Length
15 nucleotides
Bulged bases
1K73|1|A|G|2786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1K73_068 not in the Motif Atlas
Homologous match to HL_4V9F_068
Geometric discrepancy: 0.0271
The information below is about HL_4V9F_068
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_53269.2
Basepair signature
cWW-tWH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
10

Unit IDs

1K73|1|A|C|2780
1K73|1|A|U|2781
1K73|1|A|G|2782
1K73|1|A|A|2783
1K73|1|A|A|2784
1K73|1|A|C|2785
1K73|1|A|G|2786
1K73|1|A|C|2787
1K73|1|A|A|2788
1K73|1|A|U|2789
1K73|1|A|C|2790
1K73|1|A|U|2791
1K73|1|A|A|2792
1K73|1|A|A|2793
1K73|1|A|G|2794

Current chains

Chain A
23S RRNA

Nearby chains

Chain G
RIBOSOMAL PROTEIN L6
Chain K
RIBOSOMAL PROTEIN L13

Coloring options:


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