HL_1M5K_002
3D structure
- PDB id
- 1M5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a hairpin ribozyme in the catalytically-active conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CAUUGCACUCCG
- Length
- 12 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_31581.5
- Basepair signature
- cWW-F-F-F-cSH-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
1M5K|1|B|C|35
1M5K|1|B|A|36
1M5K|1|B|U|37
1M5K|1|B|U|38
1M5K|1|B|G|39
1M5K|1|B|C|40
1M5K|1|B|A|41
1M5K|1|B|C|42
1M5K|1|B|U|43
1M5K|1|B|C|44
1M5K|1|B|C|45
1M5K|1|B|G|46
Current chains
- Chain B
- RNA HAIRPIN RIBOZYME
Nearby chains
- Chain C
- PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A)
Coloring options: