HL_1M90_037
3D structure
- PDB id
- 1M90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GUUAAUAUUC
- Length
- 10 nucleotides
- Bulged bases
- 1M90|1|A|U|1505, 1M90|1|A|U|1506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1M90_037 not in the Motif Atlas
- Homologous match to HL_4V9F_037
- Geometric discrepancy: 0.0363
- The information below is about HL_4V9F_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81545.2
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
1M90|1|A|G|1498
1M90|1|A|U|1499
1M90|1|A|U|1500
1M90|1|A|A|1501
1M90|1|A|A|1502
1M90|1|A|U|1503
1M90|1|A|A|1504
1M90|1|A|U|1505
1M90|1|A|U|1506
1M90|1|A|C|1507
Current chains
- Chain A
- 23S RRNA
Nearby chains
- Chain Q
- RIBOSOMAL PROTEIN L19E
- Chain T
- RIBOSOMAL PROTEIN L23
Coloring options: