HL_1N36_004
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CCCUUGGG
- Length
- 8 nucleotides
- Bulged bases
- 1N36|1|A|U|190|||E, 1N36|1|A|G|190|||F
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1N36_004 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3567
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27483.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 2
Unit IDs
1N36|1|A|C|190|||A
1N36|1|A|C|190|||B
1N36|1|A|C|190|||C
1N36|1|A|U|190|||D
1N36|1|A|U|190|||E
1N36|1|A|G|190|||F
1N36|1|A|G|190|||G
1N36|1|A|G|190|||H
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: