HL_1N36_037
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CCGGCAACGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1N36_037 not in the Motif Atlas
- Geometric match to HL_8KAL_008
- Geometric discrepancy: 0.3472
- The information below is about HL_8KAL_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
1N36|1|A|C|1263
1N36|1|A|C|1264
1N36|1|A|G|1265
1N36|1|A|G|1266
1N36|1|A|C|1267
1N36|1|A|A|1268
1N36|1|A|A|1269
1N36|1|A|C|1270
1N36|1|A|G|1271
1N36|1|A|G|1272
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain M
- 30S RIBOSOMAL PROTEIN S13
- Chain S
- 30S RIBOSOMAL PROTEIN S19
- Chain V
- 30S RIBOSOMAL PROTEIN THX
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