HL_1N78_002

3D structure

PDB id

1N78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and glutamol-AMP.

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

CCUCUCAAG

Length

9 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_77232.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

5

Unit IDs

1N78|1|C|C|531
1N78|1|C|C|532
1N78|1|C|U|533
1N78|1|C|C|534
1N78|1|C|U|535
1N78|1|C|C|536
1N78|1|C|A|537
1N78|1|C|A|538
1N78|1|C|G|539

Current chains

Chain C

tRNA(Glu)

Nearby chains

Chain A

Glutamyl-tRNA synthetase