1N78 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1N78_001 | 1/C/513:522 | No text annotation HL_78347.5 | ||
| HL_1N78_002 | 1/C/531:539 | tRNA anticodon loop HL_81376.3 | ||
| HL_1N78_003 | 1/C/553:561 | T-loop with 2 stacked bulged bases HL_33597.3 | ||
| HL_1N78_004 | 1/D/513:522 | No text annotation | geometric HL_1N78_001 HL_78347.5 | |
| HL_1N78_005 | 1/D/531:539 | tRNA anticodon loop | geometric HL_1N78_002 HL_81376.3 | |
| HL_1N78_006 | 1/D/553:561 | T-loop with 2 stacked bulged bases | geometric HL_1N78_003 HL_33597.3 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_1N78_001 | 1/C/507:510, 1/C/525:527, 1/C/543:549, 1/C/565:566 | tRNA junction J4_95067.1 | ||
| J4_1N78_002 | 1/D/507:510, 1/D/525:527, 1/D/543:549, 1/D/565:566 | tRNA junction | homologous J4_1N78_001 J4_95067.1 |
Problematic loops
No problematic loops
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