HL_1NKW_035
3D structure
- PDB id
- 1NKW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAUGGCUAUG
- Length
- 11 nucleotides
- Bulged bases
- 1NKW|1|0|A|1468, 1NKW|1|0|U|1475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1NKW_035 not in the Motif Atlas
- Homologous match to HL_7A0S_036
- Geometric discrepancy: 0.364
- The information below is about HL_7A0S_036
- Detailed Annotation
- Pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- HL_00824.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
1NKW|1|0|C|1466
1NKW|1|0|U|1467
1NKW|1|0|A|1468
1NKW|1|0|U|1469
1NKW|1|0|G|1470
1NKW|1|0|G|1471
1NKW|1|0|C|1472
1NKW|1|0|U|1473
1NKW|1|0|A|1474
1NKW|1|0|U|1475
1NKW|1|0|G|1476
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L17
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