HL_1NKW_069

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

1NKW|1|0|A|173, 1NKW|1|0|A|176, 1NKW|1|0|G|182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|G|165
1NKW|1|0|G|166
1NKW|1|0|A|167
1NKW|1|0|A|168
1NKW|1|0|C|169
1NKW|1|0|U|170
1NKW|1|0|G|171
1NKW|1|0|A|172
1NKW|1|0|A|173
1NKW|1|0|A|174
1NKW|1|0|C|175
1NKW|1|0|A|176
1NKW|1|0|U|177
1NKW|1|0|C|178
1NKW|1|0|U|179
1NKW|1|0|C|180
1NKW|1|0|A|181
1NKW|1|0|G|182
1NKW|1|0|U|183
1NKW|1|0|A|184
1NKW|1|0|C|185

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L15

Chain Y

50S ribosomal protein L31