HL_1NKW_071

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGACCACCG

Length

10 nucleotides

Bulged bases

1NKW|1|0|G|424

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NKW_071 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2728

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

1NKW|1|0|C|422
1NKW|1|0|G|423
1NKW|1|0|G|424
1NKW|1|0|A|425
1NKW|1|0|C|426
1NKW|1|0|C|427
1NKW|1|0|A|428
1NKW|1|0|C|429
1NKW|1|0|C|430
1NKW|1|0|G|431

Current chains

Chain 0

23S ribosomal RNA

Nearby chains